Gene Fnod_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1365 
Symbol 
ID5452362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp1475886 
End bp1476932 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content43% 
IMG OID640875141 
Productnicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_001410869 
Protein GI154250044 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAG GGAAGAAGAT TAACAAAGAA ACTTTACGTA ATGATATTTT GAGAAGGCTC 
AATAATCTTA CAAAACCGGT CGGAAGTTTG GGATATCTTG AGTACTTAGC TCTTAGAATG 
GGGCTTATCC AGGGTAAGGT TATTCCAGAT CTTCCTGAAG ATAAGAGGGT TTATGTATTT 
GCGGGAGACC ATGGGGTTGT TAAGCAAGGG GTTTCAGCTT ATCCAAAAGA AGTTACAAAG 
CAGATGGTGT ACAATTTTCT CAACGGTGGA GCCGCTATTA ATGTTTTTTC ACGACACGTT 
GGAGCAACTG TTTATGTTGT CGATGCAGGT GTTGATGGTG ATTTTCCGAT TGAATCTCCT 
TATCTTATCA GAGCAAAGGT TGGTTTTGGG ACGAATGATT TTACGGAAGG CCCTGCGATG 
ACAAGGGAAC AAGCGTTGTT GTGTATAGAG TACGGGAGGA AAATAGCGCG CGAGGCGATA 
GAAGATGGTG CTGATTTGCT CGCAGTTGGC GATATGGGGA TTGGTAATAC AACAACCGCC 
ACGGCAATCG CGGTTGCTTT TGGATACGAT ATAAACGAGA TAATCGATAT TGGGACACCG 
ATAAGTACAG AGGAATTGAA GAGCAAGAAA AGGGCTGTTT TAAAGGCAAT TGAGGTAAAT 
AAGCCAAATC CGTCCGATCC AATCGATGTA CTCCAGAAAG TTGGAAGTTT TTGTATAGGC 
GAGATGGCAG GTTTTATTCT TCAAGCTGCT GAGATGGGTG TGCCGATTAT CATCGATGGT 
TTTCCGACAA CCGCTGGTTT GTTATTGGCT TGGGAGATTA ATTCAGAAGT AAGGGAATAT 
GTCTTCGCAG GTCACAAATC GAAGGTGAAA GGTCACAAGG TGATTTTAGA TACCTTAGGC 
TTGAGACCTA TCCTTGACCT AGACATGCGC CTTGGTGAAG GTACCGGTGC TGTGCTTTCT 
ATGTCGATAA TCGAAGCCGC AATAAAGATG ATTAGAGAGA TGGCTACATT CGATAGTGCG 
GGTGTTTCGA AAGGGACTGA TCAGTGA
 
Protein sequence
METGKKINKE TLRNDILRRL NNLTKPVGSL GYLEYLALRM GLIQGKVIPD LPEDKRVYVF 
AGDHGVVKQG VSAYPKEVTK QMVYNFLNGG AAINVFSRHV GATVYVVDAG VDGDFPIESP 
YLIRAKVGFG TNDFTEGPAM TREQALLCIE YGRKIAREAI EDGADLLAVG DMGIGNTTTA 
TAIAVAFGYD INEIIDIGTP ISTEELKSKK RAVLKAIEVN KPNPSDPIDV LQKVGSFCIG 
EMAGFILQAA EMGVPIIIDG FPTTAGLLLA WEINSEVREY VFAGHKSKVK GHKVILDTLG 
LRPILDLDMR LGEGTGAVLS MSIIEAAIKM IREMATFDSA GVSKGTDQ