| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1356 |
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| Symbol | |
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| ID | 5451596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1460928 |
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| End bp | 1464293 |
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| Gene Length | 3366 bp |
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| Protein Length | 1121 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640875132 |
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| Product | RAP domain-containing protein |
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| Protein accession | YP_001410860 |
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| Protein GI | 154250035 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAG CAAAGAATGA GACTATAATA AATTACATAG CCTATTTACG TGACATAAGC
AGGAAGATCG GAACCAAAAC AGATTTTGCT AAGATTTTTA CGAACGCCCT TAAGAGAAGG
GGAATGGGCA GCTACGTGAT TCCGATATCT AACAGTCAGG AGTTTAAAGT GGTATCAGAA
GATACTGTTG ATATCAGGCG GAATAGTAGA CTTTATGAAG CACTCCTCAA AATCTATCCG
ACGTTGGAAA AATATTCAGA TAAGAAGTTG TTTCTCGGTG TAGGAGGTGT ATTTGGTCAA
AGGAAATATG CTGGTCCATT TTTAGTTGCT GAGTGCGAAA TTGAAGCTTA TAAAGGAAGT
GGTTTTTCTT TATACATAGA CGTTTCATCG TCAGTACTCA ACTATGACCT AATTTCAAAG
TTACTTGACA AAAAACGAGT TGTTGCGGAT GATGAGGAAG AGTATGTTGA CCCCGAGTTA
GAGAAAGAAA TTGAAGCTAT AAGTGACATA GAGGATAAAT TATCAGTCAT AAGCGGAATT
TCCGAGCTCT TAGAATTTGG TCAAAAAGCT TTCAAACTAT TACAAGACAG TCTGAATGAT
TTCAAAGACA TATTTGATGT TTCCAAAACG TGTTTAATCA ATTTACCTGA AAATGATACC
TTACATTCAA AAGATTTTGA AGATCATGAA TGGATTGATA GATTGGATTT TCTTTACAAA
TCAAGCAAAA TTCTCTTCTT AAACGAAGGA TATTTATTCA TGGCTCAGGT TCCCAATGAA
ATATCTACCT ATCAATCTTT AAGCCGATTG ATCGATGAAG TTAGAAAAAA TGAGAGCTTT
GAGAATAGAG TGCTTGAGAA ATTGCTGAAC GGTTCCTTTT TCAGCGATAT TCAACGTACC
GAGTATGAAC CAGAGGAATT TGAAAATATA TCAACAGTTA TAGAAAAACT TATGCCAATT
CCCTTGTCAC CGGCACAAGT GAGAGCCTTG CAAAATGCTT TCAGCCACGA TATGAGCTAC
ATTCAAGGTC CTCCAGGTAC CGGAAAGTCT CACACGATTT CTGCAATGGT TTTAGCGGCA
ATATTAACAG GAAGAAAAGT CCTTGTTGTA TCACAAAAAC CACCGGCAGT AAAAGTTGTA
AAAGAAAAAG TAGAAGGTGT TTTGAAGAAT AATGACTCTA ACTTAAAGAT TTTACCGCTC
ATATACTTTG ACAAACAAAC AAAAGCTGAT CTTAAAGATT CATTGAAATC TCTACTGAAT
GAATATTCTA ATCCGTATTA CTTGGAATCG AGAATTAAGA CTATAAGAAC CAAGAAGCAA
GAAATAGAAA ATCAACTTCA GTCAAAGATT ACTGATCTTA ATAGGATTCA GAATGAGTAT
GAAGAAAGTT TAAGAAAACA GAAGCACTTT ATCAATTTAA GCAATGAGCT TCAAAAGATG
AAAGACAAGT TCAGATATGC TTATAACTAT GATTTGTCAA AGGAGGTGTT AGCAAACGTA
TCTGATGACA ACTTGAAGAA AATATCAAAG CTATCTGTGC TAGCGAGAAA GCTTGACAAC
ATTTCAGAAA ATAGGGTCAC AATACTTTAC AAAATAAACC TTGGAAAGGT TGTCATGAAA
ATATCACCTG TTAAACTTAG TGGAAGAGTA ATATTAAACA TTCTCAAAAG AAGGATTTTC
CACCAATTTC TTCAAGACAT TATCAACGTT GGTTCTCTGA ATCTAAGTAT TCGTCGCACA
ACAATTAAGG ACCCGGCCTT TTTACAAGAG GAAATATCAA GGATAAAGAA AGAGCTTTGG
GACTTGAAAA GGCACTATAT AGTGCTGGAG AATCAAGTTA GAATCTTGGA AGGTATTCGT
ACATCTCGTG AGCAGATAGA GTATTTTTCA AAGCTTTTAT CGTACAAGAA ACCAACACTA
ATTAAAGAAT ACCAGTCATA TATCGACTGG GAAAAGATAT TGGAAGTATT TCCTGTGTGG
ATTTCTGAAA TCAGGAATCT CACAGAGATT TTACCGGTGA AAGCAAATAT GTTCGATTTA
GTTGTAGTCG ATGAAGCTTC ACAAGTTAAC TTAGCTGAAA TTATTCCCGC TTTTTATAGG
GGAAAGAAAA TATGTATAGT TGGTGATCAT AAGCAACTCA ACCTAAATGC CACAGGGTTA
GATTTTCTTA TTAGCAAGAA TCTTGACAGA CTGACGTGGG AAAAGTATCG TCCAAACAAC
CTGACATATC AGGAAGCTCG TGCAAAACAG CTTACTGTAA CAACTTCTTC AATATTAGAT
TTCATAATGC AGGACGAGAG AGCTTTAGCA CTTCCTCGTA CGATGTTGGA TGAGCATTTT
AGATCCCTAC CCGCCTTGGC TAAATTTAAC AACGAGAAGT TCTATGAGGG AAAGCTTAAA
ATAATGACTG AAACACCTGA AAAGATTTCA TTAACGTGTT TCTTCCCAAT AAAGGTTAAC
GGAAGGAGAC AAAGCGATAA AACTGTTATT GAAGAGGCTG AGAAAGTAAT AGAGATTATT
ACTGAACTTA TCAAGTATAG AAAATGCAAA GACTTTGAAC TCCATCATTT GGTACCAAAG
GATTTTACCA TAGGTGTGGT ATCGTTTATT AGAAATCAAG TAGAACTAAT CAAAGACCTA
ATTTATGAAA CATTCGACCC TGATACTACA GGAAAACATG ATATTATTAC AGGAACTCCT
GAAGAGTTGC AAGGTCATGA AAGAGATATA ATGATACTTT CATTGGCTTT GGATGAGAGT
TCATCGAGGA GTTCAACATT CTATGAGAAT AAAAATCGAT TTAACGTTGC AACTAGCAGA
GCTAAGTACG TTACCTTTGT TGTTTATTCA AGTGTACCTG ATAATTTTGC TTTAACGAGA
GCATATTTCA GCAATTTTGG ATTTGAACCC AATGTCTTTG GTAGTACCGA GCAACAGAAA
TTTACATCAC CAATAGTTTG GAAGCTGGAC TTAATGGCAA TGGAATCGGA ATTTGAAAAA
ATCGTATTCA AATACCTAAA TGAGTACATA CAAGGGAGAA AAGAAGTATC TGAACTTAAA
ATATTCAATC AGGTAAAGTC TTGTGGTAAG AGGCTGGATT TTGTAGTTTA TAATCCTCGA
AATGGTCATT ATGTTGCGGT AGAAGTTGAT GGAGTACATC ATTTTGTTGA AGATGGTCGA
AACTATTCAG AAAGCCATAT CGAAAGGATG GAAATGCTCA GAAGGGCTGG TTGGAAAATA
ATTAACACGC CGTACTATAA GTGGTACAAT CATGGATGGC TTGATGAAAA TTCTGAAATC
TTAAAAAGAG AAATAGAAAG GATCTATAAG GAACTTGATA AATCGCTTGG CATAAGAATA
GATTAA
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| Protein sequence | MEQAKNETII NYIAYLRDIS RKIGTKTDFA KIFTNALKRR GMGSYVIPIS NSQEFKVVSE
DTVDIRRNSR LYEALLKIYP TLEKYSDKKL FLGVGGVFGQ RKYAGPFLVA ECEIEAYKGS
GFSLYIDVSS SVLNYDLISK LLDKKRVVAD DEEEYVDPEL EKEIEAISDI EDKLSVISGI
SELLEFGQKA FKLLQDSLND FKDIFDVSKT CLINLPENDT LHSKDFEDHE WIDRLDFLYK
SSKILFLNEG YLFMAQVPNE ISTYQSLSRL IDEVRKNESF ENRVLEKLLN GSFFSDIQRT
EYEPEEFENI STVIEKLMPI PLSPAQVRAL QNAFSHDMSY IQGPPGTGKS HTISAMVLAA
ILTGRKVLVV SQKPPAVKVV KEKVEGVLKN NDSNLKILPL IYFDKQTKAD LKDSLKSLLN
EYSNPYYLES RIKTIRTKKQ EIENQLQSKI TDLNRIQNEY EESLRKQKHF INLSNELQKM
KDKFRYAYNY DLSKEVLANV SDDNLKKISK LSVLARKLDN ISENRVTILY KINLGKVVMK
ISPVKLSGRV ILNILKRRIF HQFLQDIINV GSLNLSIRRT TIKDPAFLQE EISRIKKELW
DLKRHYIVLE NQVRILEGIR TSREQIEYFS KLLSYKKPTL IKEYQSYIDW EKILEVFPVW
ISEIRNLTEI LPVKANMFDL VVVDEASQVN LAEIIPAFYR GKKICIVGDH KQLNLNATGL
DFLISKNLDR LTWEKYRPNN LTYQEARAKQ LTVTTSSILD FIMQDERALA LPRTMLDEHF
RSLPALAKFN NEKFYEGKLK IMTETPEKIS LTCFFPIKVN GRRQSDKTVI EEAEKVIEII
TELIKYRKCK DFELHHLVPK DFTIGVVSFI RNQVELIKDL IYETFDPDTT GKHDIITGTP
EELQGHERDI MILSLALDES SSRSSTFYEN KNRFNVATSR AKYVTFVVYS SVPDNFALTR
AYFSNFGFEP NVFGSTEQQK FTSPIVWKLD LMAMESEFEK IVFKYLNEYI QGRKEVSELK
IFNQVKSCGK RLDFVVYNPR NGHYVAVEVD GVHHFVEDGR NYSESHIERM EMLRRAGWKI
INTPYYKWYN HGWLDENSEI LKREIERIYK ELDKSLGIRI D
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