Gene Fnod_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1348 
Symbol 
ID5452411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1451238 
End bp1452425 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content32% 
IMG OID640875124 
Producttransposase IS204/IS1001/IS1096/IS1165 family protein 
Protein accessionYP_001410852 
Protein GI154250027 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCAAAT CTAATTATAT CACTGAACTT TTAAAATCGA AAGATATTAT TCTTCACCAA 
ATGAATGAGA ATGAAAGTGA AATAGAACTT CACATAAGTC AGGTACAAAA GCCCCACAAA
TGTCCTAAAT GTGGTAATAT TACAAGTAAG GTACATGATT ATCACACACA GAAGGTAAAA
GACGTACCTA TAATGGGCAA GAAAACATAT TTGATTATAA GAAAGAGAAG ATATGTCTGC
AAAGCATGTG GGAAGAAGTT TTTTGAACAC ATAAGTTTTT TAGGCAAATC TCAAAGGATG
ACAAATAGAC TTGCAGCATA TATTATAAGT CAACTTGGAA GTTTAACAAG TATGAAGGAG
GTAGCAAAAT ACACAAATGT TTCAGTGACA ACAGTTATGA GATTGTTTGA TAAAGTAAAT
CCAGGTCAAA CTGTAGATGA GTTTTCTTCT GAAGCAATAT GTGTAGACGA GTTTAAAGGC
AATGCAGGTG GAGCAAAATA TCAATGTATA TTTGTAGATC CTGTAAAAGG GCAAATAATC
GAGATTTTGA AAGATAGAAA GCAAAATATT TTAATTGAGT ATTTTAAGAG GCTGAAAGGT
AGAGATAAAG TAAAATATTT TATCTGTGAT ATGTGGAGAC CATTTGTAGA GGTAGCAAAA
ACATATTTTA AAAACGCTAA AATAGTGATA GACAAATTTC ATTTTACCCG ATACGTTTAT
TGGGCTTTAG AAAATGTGAG GAAAAGGGTA CAAAAGGAAT TAGGAAGTAA TTTGAGGAGA
TATTTTAAGA GGAGTAGGAA GTTGTTATTG AAGAATTATG AAGAACTTGA GCCTGAGCAA
AGAGAAGAAT TAGAAGTAAT GTTTTGGTAT AGTCAAGATT TGAGGAAAGC CCATCAACTC
AAAGAAGAAT TTAAGAGAGT GTTAAAGAGC AGTAATTCTG AAGAAGCAAG ACTCGTATTA
AAAAAGTGGA TAGAGAGAGC AGAGCAAAGT GGACTTTCTG AATTTATGAG ATGTGTAAAG
GTTTTTAGGA GCTGGTTTTC TGAGATAGTA AATGCATTTG ATGTTCCATA TACGAATAGT
ACGACAGAGG GTTTTAACAA CAAGATAAAA GTATTAAAGA GGAATGGATT TGGATACAGG
AATTTTGAAA GATTCAGGAA GAGGATTTTG TACAGTTGTG GTAGATAA
 
Protein sequence
MLKSNYITEL LKSKDIILHQ MNENESEIEL HISQVQKPHK CPKCGNITSK VHDYHTQKVK 
DVPIMGKKTY LIIRKRRYVC KACGKKFFEH ISFLGKSQRM TNRLAAYIIS QLGSLTSMKE
VAKYTNVSVT TVMRLFDKVN PGQTVDEFSS EAICVDEFKG NAGGAKYQCI FVDPVKGQII
EILKDRKQNI LIEYFKRLKG RDKVKYFICD MWRPFVEVAK TYFKNAKIVI DKFHFTRYVY
WALENVRKRV QKELGSNLRR YFKRSRKLLL KNYEELEPEQ REELEVMFWY SQDLRKAHQL
KEEFKRVLKS SNSEEARLVL KKWIERAEQS GLSEFMRCVK VFRSWFSEIV NAFDVPYTNS
TTEGFNNKIK VLKRNGFGYR NFERFRKRIL YSCGR