Gene Fnod_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1347 
Symbol 
ID5452718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1448846 
End bp1451038 
Gene Length2193 bp 
Protein Length730 aa 
Translation table11 
GC content35% 
IMG OID640875123 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001410851 
Protein GI154250026 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAA AAGAAGAGAA AAGGACATTG AAAATAACAG GTATGACTTG TGCAAATTGT 
GCGAGAATAG TTGAAAAATC ACTTTCAAAA GTTGAAGGTG TGAAATTTGC TGCGGTAAAT
TTAGCCACAA ATACCGCTTT TGTTGTACTT GAAAAAGAAG TAGATGAAGA AAAATTAAAA
AAAGCTGTCG AAAATGTTGG ATACGGTGTT TCTGACGAAC CTATAGAAAT GATAGAAGAA
AAGAGATTGA AAAGAATAAA ATCTAACATG ATAATTGCTT TGGCATTGAC CATTCCTCTA
ATGATTCTTA TGTTTTTACA CACGAGTGGT AAACATATTC CTTATTTCAA AGAGATTGAA
TTAATCGTTT CCGCAATAGT CATATTTTAC GCTGGTAGAG ACACAATAAA AGGAGCTAGC
ATCGCCCTTT TGCATAAACA CTCAAATATG GATACGCTTA TTCTTTTTGG TTCTGCTACA
GCTTGGTCAA CAAATATCTT GACTTATTTT GGCACTAATA TCCTTCCTTT TGGTACAATT
GGTGCTGTGA TAGTTTCTTT GCATCTTCTT GGAAGATACA TAGAATCGTA TCTTAGAGAC
AGAGCATCGA AACAAGTAAG AGAATTAATT AATCTGCAAG CTAAGGAAGC GCTTGTAATA
ACGGACAAAG GTGAAATTTT AATGCCGGTT GAGGCAATAA AAGAAGGCTC CATAGTTGTC
GTTAAACCAG GCGAAAGAAT TCCAGTAGAT GGAATTATAG TCGAAGGTAG TACATCCATA
GACGAGTCTA TGATTACAGG TGAATCGATA CCTGTTTCAA AAGAAGTAAA CGATGAAGTT
GTTGGTGGTT CATTAAATCT TACAGGTGCT ATAAAGATTA AAGTGACAAA AGTTGGTGAA
GATACTTTTT TATCGAAGAT AATAAATCTT ATTCAAGAAG CTCAAGGCGC AAAGGTTCCA
ATTCAAGCAT TAGCAGACAG GATAACAAAC TGGTTTGTAC CAATGATAAT ATCATTAGCT
ACAATAAGTG CTTTTGTTTG GTATTTCAAT TTTGAAAATC TCAATATGCT AACTCAAAGC
ATAAGAAGTT TTCTTCCATG GACGCTCCAT ACATCAGATC CACTTTCGTT TGCGGTTTTC
GTATTTTTGA CAACCGTTGT TATAGCCTGT CCTTGCGCAC TTGGTCTTGC AACTCCGATG
GCGCTAATTG TCGGAACTTC TTTGGCTGCA AAAAAAGGAT TACTTATAAG AAACGCCGAG
GCTATTCAAA CAGCTAAAGA GGTTGGATAT GTACTCTTTG ATAAAACTGG AACATTGACA
GAAGGGAAAC CACAGGTAAT TTACACAGAT TTGCCAGAAA GCGAGTATGA AAAAATACTG
GCTATCGAAA ATCTATCCAA CCATCCTCTT GCAAAAGCTG TAGTTGATTA TCTGAGAACG
CAAATTAATA ATAAAAATAA CGATATTGAA ATAGAAAAGT TTGAAGAACT GCACGGAAAA
GGCGTAAGAG CAAGAGTGAA TGGTGATTTT TATTTCATAG GAAAAACTGA AAATATATCA
GCTTACGAAG ATTACACAAT AAACGGTTGC TCAATTGTGG AAGTGCGAAA AAACGAAAAT
ATATTAGGTT TCTTTGCGAT CCAAGATGTT ATAAGGCACG ATTCAAGAGA AGCGATATAC
AAATTAAGCA AAATGGGTAT AACCCCTGTT ATGGTTACTG GCGATAATGA AAATACCGCA
AGATTTGTTG CAGAAAAACT CGGAATAAAA GAAGTATTTG CAAACGTCAA ACCTGAGGAA
AAATTGGATA TCGTTAGAAA ATTTCAAGCT AAAGGCAAGA AAGTTATAAT GGTAGGCGAT
GGTATAAACG ATGCAGCAGC TCTGAAAAGC GCGGATATAG GAATAGCCGT AAGTAGTGGA
AGTGACATTG CGTTAGATAA TTCTGATATA ATTATTACAA AAGGTGGAAT ATCAAAAGTT
GTTGATGCGA TAGAAATATC TAAATTAACG TTCAAAGCTA TCAAAACAAA TTTACTTTTT
GCGTTTTTCT ACAACGTTTT GGCTATTCCA CTTGCGATGT TTGGATTATT GCACCCAGCT
ATAGCAGAAG GCGCCATGGC GATGAGTTCA ATTACAGTTA TAATTAATTC CATGAGAATT
AGAAAAGAAA AGAAGCCTTC ATGTTGCAGT TAG
 
Protein sequence
MELKEEKRTL KITGMTCANC ARIVEKSLSK VEGVKFAAVN LATNTAFVVL EKEVDEEKLK 
KAVENVGYGV SDEPIEMIEE KRLKRIKSNM IIALALTIPL MILMFLHTSG KHIPYFKEIE
LIVSAIVIFY AGRDTIKGAS IALLHKHSNM DTLILFGSAT AWSTNILTYF GTNILPFGTI
GAVIVSLHLL GRYIESYLRD RASKQVRELI NLQAKEALVI TDKGEILMPV EAIKEGSIVV
VKPGERIPVD GIIVEGSTSI DESMITGESI PVSKEVNDEV VGGSLNLTGA IKIKVTKVGE
DTFLSKIINL IQEAQGAKVP IQALADRITN WFVPMIISLA TISAFVWYFN FENLNMLTQS
IRSFLPWTLH TSDPLSFAVF VFLTTVVIAC PCALGLATPM ALIVGTSLAA KKGLLIRNAE
AIQTAKEVGY VLFDKTGTLT EGKPQVIYTD LPESEYEKIL AIENLSNHPL AKAVVDYLRT
QINNKNNDIE IEKFEELHGK GVRARVNGDF YFIGKTENIS AYEDYTINGC SIVEVRKNEN
ILGFFAIQDV IRHDSREAIY KLSKMGITPV MVTGDNENTA RFVAEKLGIK EVFANVKPEE
KLDIVRKFQA KGKKVIMVGD GINDAAALKS ADIGIAVSSG SDIALDNSDI IITKGGISKV
VDAIEISKLT FKAIKTNLLF AFFYNVLAIP LAMFGLLHPA IAEGAMAMSS ITVIINSMRI
RKEKKPSCCS