| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1343 |
|---|
| Symbol | |
|---|
| ID | 5453265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1444798 |
|---|
| End bp | 1445799 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640875119 |
|---|
| Product | 6-phosphofructokinase |
|---|
| Protein accession | YP_001410847 |
|---|
| Protein GI | 154250022 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAGAA TAGGTATACT CTCAGTAGGT AACGACTGTC CAGGTTTAAA TGCTGCGATA
AGGTCAGTTG TAGTAAATGC AATTGAAAAA GAGATAGAGG TAATGGGAAT AAAAGATGGT
TTTGAAGGGT TACTTAAAGA TAAAGTGGAT ATACTAGTTA GAGACGACGT TTCTGGTATA
CTCCACAGAG GTGGAACGAT ACTTGGGACT TCGCTATTTA TCCCAGAAAA AGACGAAGAT
TTAGTAACTA TAAAAAACAA AACAACTCAA TATGGCATAT CAGGATACAT TATTTTTGGA
GGAAGAAACG CGGTTAAAAG TGCTTTGAAC TTGCAAAAGT ACGGAATACC AAGCATAATA
GTTCCAGCAA CGATAGACAA TGATTTATCG TTTACCGACT TCTCAATAGG TTTCATCACA
GCACTTGAGC ATGTGACTCA AGCACTTGAT ATTATCCACT CAACAGCTGA ATCACACCAC
CGTGTAATGA TAGTAAAGAC AATGGGAGCA CCGGGTGGAT GGCTTGCGAC ATTTGGAGGA
CTCGCAGGTG GAGCCGATTT TGTTGTAACA AGTTCTGATG CTGTAGATCC AAAAGAACTT
GTCACAACAA TTCAACACAG ATACGAAAGC GGAAAAAGAT TCTCGATCGT AGTTGTTGAA
GATGGAGTAA AACTACCAGA TGAAATATTA GATGAATGCA AATGCTCATA TGAAACAGAC
CCAGCTGAAG TTATAGGACT TTACATAGAA AGAAAATTAA ACATCGAATG GCGTTACACA
AACCTTGGCT ATATCCAAAG GGGAGGCGTG CCAGCTGCAA TTGATAGAAT TATTGCAACG
CAGATGAGTG CTCGTGCTGT CGAACTAGTA AAAATGGGTA AATTCTACCA TGCGGTTGGA
GTTAAAGGAT TCATAGTTAC AGAAGTACCT TACAGCGAAA CAATGCTTAA CGTGAGACCT
GTAGATTACT ACATTAAGCA ATTGGCGAAA ATTTTCTACT GA
|
|---|
| Protein sequence | MRRIGILSVG NDCPGLNAAI RSVVVNAIEK EIEVMGIKDG FEGLLKDKVD ILVRDDVSGI
LHRGGTILGT SLFIPEKDED LVTIKNKTTQ YGISGYIIFG GRNAVKSALN LQKYGIPSII
VPATIDNDLS FTDFSIGFIT ALEHVTQALD IIHSTAESHH RVMIVKTMGA PGGWLATFGG
LAGGADFVVT SSDAVDPKEL VTTIQHRYES GKRFSIVVVE DGVKLPDEIL DECKCSYETD
PAEVIGLYIE RKLNIEWRYT NLGYIQRGGV PAAIDRIIAT QMSARAVELV KMGKFYHAVG
VKGFIVTEVP YSETMLNVRP VDYYIKQLAK IFY
|
|---|
| |