Gene Fnod_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1335 
SymbolrnhB 
ID5452286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1437305 
End bp1438042 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content34% 
IMG OID640875111 
Productribonuclease HII 
Protein accessionYP_001410839 
Protein GI154250014 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAA AAGGGACAAT TGACTATTCC ATTATAGGTG TTGACGAAGC TGGCAGGGGC 
CCAATTTTTG GTCCGGTAGT TGCGGCTGCT GTTTTTTTTG ATGAGGGTAT ATACATAGAA
GGGATAACGG ACAGCAAAAA ACTTAGTGAA TCCAAAAGAG AAGAGCTGTA TGAAAAAATA
TCTTTTAGCG CAAAGTTTGG AATCGGAATA GCCACACCAG ACGAAATAGA TGTATACAAT
ATACTTCATG CGACTGAATT AGCGATGAAT AGAGCGCTGG AAATACTTTC TTATTATATC
AAGATAGATG AAGGAAAAAA TATTTATGTT GATGGAAAGG ATTTGAGACT GAATTTTCCT
TCTAAGTGTA TTGTAAAAGG TGATGAAAAA GTTTATCAAA TATCGGCTGC ATCAATTTTG
GCAAAAGTGA CACGGGATAG GATAATGAAA AAGTTTGATA AAGAATTTCC AGAATATAAT
CTATCAAAAC ACAAAGGATA TGCTACTTCT GAGCATATTG AATTACTAAA AAAGTATGGT
CCCACTCCGT ATCATCGTTT AACCTTTGAT CCAGTATTTC AATTGGTAAC TCCTTCTTTG
TTAGATAAAT GGTTAACTGA AAACATGATT ACTTTAGAAA GATACATTAT TTTAATAAAA
TCAATGGAGG TGGACTTGTT TGGCAATAGA CGAGACGTCA GGAAAAAGAG CAGAAAGACA
AAATATGGAA AATATTGA
 
Protein sequence
MSTKGTIDYS IIGVDEAGRG PIFGPVVAAA VFFDEGIYIE GITDSKKLSE SKREELYEKI 
SFSAKFGIGI ATPDEIDVYN ILHATELAMN RALEILSYYI KIDEGKNIYV DGKDLRLNFP
SKCIVKGDEK VYQISAASIL AKVTRDRIMK KFDKEFPEYN LSKHKGYATS EHIELLKKYG
PTPYHRLTFD PVFQLVTPSL LDKWLTENMI TLERYIILIK SMEVDLFGNR RDVRKKSRKT
KYGKY