Gene Fnod_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1325 
Symbol 
ID5452622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1430108 
End bp1430635 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content35% 
IMG OID640875101 
Productcupin 2 domain-containing protein 
Protein accessionYP_001410829 
Protein GI154250004 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG GAAGTAAGAT AAAACGCCTA AGATTAGCAA GGGGATACAC ACAAGAAGAA 
TTGGCCGATA GATGTGATTT ATCACGAAGT TTTATATCAC AGTTAGAGAG CGATAAAGTT
TCACCATCTG TTGAAACATT AGAACGGGTC TTAAGGGTAT TAGGTACAGA TTTAAAGCAC
TTCTTTAGCG ATGAACAGAA GAAAATTATC TTCAAAAAAA ATGAAAGGGT ACCTATGTAC
GAATTACCAA AAGGTGTAAA AATTGATATT CTAATGGATG GAATAGAAGA CAAAGAAATA
GATGCAAAAA TTGTTGAGCT TGAACCAGGT TCACAAACAG AACAAGAAGA TTATCACGAC
GGTGATGAGT TCGGGTATGT TATCGAGGGC TCTGTAGAAA TTTATATCGA TGGAAAAAAA
TACAGGGCAA ATGAAGGAGA TTGTTTTTAC TACTCGGCAG ATTGTATCCA CTATCTCAGA
AACCCAGGGA AGGAAAAAGC AAAAATACTT TGGATCCAAA CAATATGA
 
Protein sequence
MKIGSKIKRL RLARGYTQEE LADRCDLSRS FISQLESDKV SPSVETLERV LRVLGTDLKH 
FFSDEQKKII FKKNERVPMY ELPKGVKIDI LMDGIEDKEI DAKIVELEPG SQTEQEDYHD
GDEFGYVIEG SVEIYIDGKK YRANEGDCFY YSADCIHYLR NPGKEKAKIL WIQTI