Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1325 |
Symbol | |
ID | 5452622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1430108 |
End bp | 1430635 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640875101 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001410829 |
Protein GI | 154250004 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG0662] Mannose-6-phosphate isomerase [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTG GAAGTAAGAT AAAACGCCTA AGATTAGCAA GGGGATACAC ACAAGAAGAA TTGGCCGATA GATGTGATTT ATCACGAAGT TTTATATCAC AGTTAGAGAG CGATAAAGTT TCACCATCTG TTGAAACATT AGAACGGGTC TTAAGGGTAT TAGGTACAGA TTTAAAGCAC TTCTTTAGCG ATGAACAGAA GAAAATTATC TTCAAAAAAA ATGAAAGGGT ACCTATGTAC GAATTACCAA AAGGTGTAAA AATTGATATT CTAATGGATG GAATAGAAGA CAAAGAAATA GATGCAAAAA TTGTTGAGCT TGAACCAGGT TCACAAACAG AACAAGAAGA TTATCACGAC GGTGATGAGT TCGGGTATGT TATCGAGGGC TCTGTAGAAA TTTATATCGA TGGAAAAAAA TACAGGGCAA ATGAAGGAGA TTGTTTTTAC TACTCGGCAG ATTGTATCCA CTATCTCAGA AACCCAGGGA AGGAAAAAGC AAAAATACTT TGGATCCAAA CAATATGA
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Protein sequence | MKIGSKIKRL RLARGYTQEE LADRCDLSRS FISQLESDKV SPSVETLERV LRVLGTDLKH FFSDEQKKII FKKNERVPMY ELPKGVKIDI LMDGIEDKEI DAKIVELEPG SQTEQEDYHD GDEFGYVIEG SVEIYIDGKK YRANEGDCFY YSADCIHYLR NPGKEKAKIL WIQTI
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