Gene Fnod_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1307 
Symbol 
ID5452871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1412876 
End bp1414063 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content39% 
IMG OID640875083 
Productpyridoxal phosphate-dependent acyltransferase, putative 
Protein accessionYP_001410811 
Protein GI154249986 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase
[TIGR01825] pyridoxal phosphate-dependent acyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATT ATAAAATTTT AGAAGATGAA ATGGAAAATT TGAAAAATGA AGGTCTGTAT 
ATTAACATTA GGACACTTGA ATCACCACAG GGAGCATGGA TAGTTGTTAA TGGTAAAAGG
GTACTTAACT TGTGTTCAAA TAATTATCTT GGTTTTGCAA GCGATGAAAG ATTAAAACAA
GCTGCAAAAA AAGCTATTGA TGAATGGGGC GTCGGTCCAG GAGCAGTTAG AACAATTGCA
GGTACAATGA AAATCCACGA AGAACTTGAA AAAGCGCTAG CGGAATTTAA AGGAGCAGAT
GCGACGATAT TCCTACAATC CGGTTTTATA GCGAACCAAG CAGCTATACC AACGGTGTTT
GGCGATGAGA ACGATGCAAT TATTTCAGAT GAACTGAACC ACGCAAGTAT AATTGATGGT
GTTAGGCTCT CAAAAGCCAA AAGGTACGTT TATAAGCACA ACGATATGAA TGAACTTGAG
GCAAGGTTGA AAGAGGCAAG AGATGTTCAA AAGGCAAGAA GAATATTGAT AATAACTGAT
GGTGTTTTCA GTATGGATGG TGATATTGCC CCGCTTCCAG AAATCGTTGA ACTTGCCGAA
AAATACGAAG CGGCAGTTAT GGTTGACGAC GCGCATGGCG AAGGGGTATT AGGTAGAGGA
GGAAGAGGTA TAGTCGATCA TTTCGGATTA CATGGAAGGG TGGACATGGA AATTGGTACG
CTTTCAAAAG CGTTTGGTGT GCTTGGTGGA TATATTGCAG GTAAAGAAAC ACTCATAAGG
TACTTAAAAC AGAAAGCGAG ACCATTTTTG TTCAGTACAG GATTGACACC AGCGGATGTT
GCGGCATGTC TCGAGGCAGT AAAGATACTC CAAGAAAGTG ATGAGAGAGT TAAAAGATTG
TGGGATAATG CAAATTACTT TAAGAGTGAG ATGAAAAAAC TTGGGTTTGA CCTAGGCGTA
AGTCAGACAC CTATTACTCC CGTTATGTTG TACGATGCCA AAGTTGCGAG TCAATTTAGT
AGAGAACTAT TCGAAGAGGG AATATTCGCA CAATCGATAG GTTATCCAAC AGTACCGAAA
GGTAAAGCAA GGATAAGAGT AATGATAAGC GCGGTACATA CAAAGGAAGA TTTGGACTTC
GCTCTCGATA AATTTGAAAA AGTTGGAAAG AAATTTGCGA TTATTTAA
 
Protein sequence
MFNYKILEDE MENLKNEGLY INIRTLESPQ GAWIVVNGKR VLNLCSNNYL GFASDERLKQ 
AAKKAIDEWG VGPGAVRTIA GTMKIHEELE KALAEFKGAD ATIFLQSGFI ANQAAIPTVF
GDENDAIISD ELNHASIIDG VRLSKAKRYV YKHNDMNELE ARLKEARDVQ KARRILIITD
GVFSMDGDIA PLPEIVELAE KYEAAVMVDD AHGEGVLGRG GRGIVDHFGL HGRVDMEIGT
LSKAFGVLGG YIAGKETLIR YLKQKARPFL FSTGLTPADV AACLEAVKIL QESDERVKRL
WDNANYFKSE MKKLGFDLGV SQTPITPVML YDAKVASQFS RELFEEGIFA QSIGYPTVPK
GKARIRVMIS AVHTKEDLDF ALDKFEKVGK KFAII