Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1305 |
Symbol | |
ID | 5452380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1409788 |
End bp | 1411584 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640875081 |
Product | ABC transporter related |
Protein accession | YP_001410809 |
Protein GI | 154249984 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAA TTATTCAAGA AAGGCAAACC AAGTTTAATC CTAAATTGTG GGCTAAATTT TGGATTTTCT TAAAGGAGTA CAAATTTCAC TTCATTTTTT TAATAATAAT TATGATTCTT GTTGGGCTTA TCGATGCAAC TTATCCATAT TTGACTAAAT ATGCTATAGA CAATTTTATT GCCAGAAAAA ATTTGAATGG TTTTAGCAAA TACTTTATTT TGCTCTTAGC AATAGGCTCT TTACAAGCAT GTGGAACGTA TTTTTTGATA ACACTTGCTG GAAAAATAGA AAATGGTTTT GCCTATAATG TTAGAAATGC GTCATTTAAA AAGCTTCAAT CTTTATCGTT ATCATTTTTC GATAATACAC AAACGGGTTT TCTCATTTCG CGCGTGATGT CTGATGTTCA AAAAGTCAGT TCAGTTATGT CATGGCAGAT AGTTGATGGA GTTTGGGCTA TTTCTTCTAT GACGTTTATT TTAATTTACT CTTTCTTACT TAGTTGGCAA CTTACACTTT TCATACTTTT TGCAATTCCA TTGATTGCTT TTGTCGGTTG GTATTTCCAA AGAAAAATAC TTAAACAATA CAGAATTGTC AGAAAGCTTG TTTCAGAAGT GACGGGTATA TACAATGAAG GACTGATGGG TGCAAAAACA GTAAAGGTAT TGTCTGTTGA AGATTTGGTA TCGAAAGATT TTAAAAAACA TACAGATGAG CTGAAAAATG CTTCGATAAA AGCTACCATT CTTTCAGGAA TGTACACTCC GATAGTTATT TTCATCGGTA ATATAGTCAC AGCTCTTATT CTTGTGTACG GAGGAAAGAG AACGTACATA AATGTTTTAA GTATCGGTAC TTTGAGTGCA GCTATTTCTT ATTCCATCCA ATTTTTCGAG CCAATATATC AACTTGCAAG AGTATTAGCT GACCTTATAT CAGCTCAAGC AGCTGCCGAA AGAGTTCTCG AACTCATCGA AACTGAACCT GAGATATTGG ATACCCCTGA TGCCATTGAC GTAGACATTC AAGGGGAATT GGTTTTTGAT AATGTATCGT TCAAATATTC AAAAGGTGAC TGGGTTATTA AATCGTTTAA CTTAAAAGTT CGTAAAGGGG AAACAATCGC TCTTGTAGGT GATACCGGTG CTGGAAAAAC AACGATAGTA AATTTAATAG GCAGGTTTTA CGAACCAACT CAAGGTACGA TATACATAGA TGGCGTAGAT TACAGAAAAA TCAAAATAAA AAAACTGAGA GAAAGCATAG GCTATGTACT TCAAACACCG CATTTATTTA ATGGGACTAT CGCTGAGAAC ATAAGATACG GTAGGCTAGA TGCAACAATG GAAGAAATAA TAGAAGCGGC AAAATTAGTA AATGCCCATG ATTTTATAAT GAAATTGGAG AATGGGTATG AAACAAACGT TGGTGAAAGC GGTGCGAATT TATCACTCGG TCAAAGACAA CTTATTTCAC TTGCGAGGGT TGTGATTGCT AATCCGAAGA TTTTAGTATT AGATGAAGCA ACAAGCTCTA TAGACACATA TACGGAACAT TTAATACAAG ACGCTATTCA CAAACTGCTA AAAGGAAGGA CAAGCTTTGT CATAGCCCAC AGATTATCCA CTATAAGGAA CGCCGATAAG ATATTGGTTA TTGAAAATGG GGAAATAATA GAAGAAGGTA CACATGAACA ATTGATGAGG AAAAAAGGAA AGTATTACAG ATTGTATATG AACCAATTTG TACAAGAGAA AGAAAAAGAG ATATTGGGAG AGAAAGAGCA GGTTTAG
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Protein sequence | MEEIIQERQT KFNPKLWAKF WIFLKEYKFH FIFLIIIMIL VGLIDATYPY LTKYAIDNFI ARKNLNGFSK YFILLLAIGS LQACGTYFLI TLAGKIENGF AYNVRNASFK KLQSLSLSFF DNTQTGFLIS RVMSDVQKVS SVMSWQIVDG VWAISSMTFI LIYSFLLSWQ LTLFILFAIP LIAFVGWYFQ RKILKQYRIV RKLVSEVTGI YNEGLMGAKT VKVLSVEDLV SKDFKKHTDE LKNASIKATI LSGMYTPIVI FIGNIVTALI LVYGGKRTYI NVLSIGTLSA AISYSIQFFE PIYQLARVLA DLISAQAAAE RVLELIETEP EILDTPDAID VDIQGELVFD NVSFKYSKGD WVIKSFNLKV RKGETIALVG DTGAGKTTIV NLIGRFYEPT QGTIYIDGVD YRKIKIKKLR ESIGYVLQTP HLFNGTIAEN IRYGRLDATM EEIIEAAKLV NAHDFIMKLE NGYETNVGES GANLSLGQRQ LISLARVVIA NPKILVLDEA TSSIDTYTEH LIQDAIHKLL KGRTSFVIAH RLSTIRNADK ILVIENGEII EEGTHEQLMR KKGKYYRLYM NQFVQEKEKE ILGEKEQV
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