Gene Fnod_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1305 
Symbol 
ID5452380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1409788 
End bp1411584 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content34% 
IMG OID640875081 
ProductABC transporter related 
Protein accessionYP_001410809 
Protein GI154249984 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA TTATTCAAGA AAGGCAAACC AAGTTTAATC CTAAATTGTG GGCTAAATTT 
TGGATTTTCT TAAAGGAGTA CAAATTTCAC TTCATTTTTT TAATAATAAT TATGATTCTT
GTTGGGCTTA TCGATGCAAC TTATCCATAT TTGACTAAAT ATGCTATAGA CAATTTTATT
GCCAGAAAAA ATTTGAATGG TTTTAGCAAA TACTTTATTT TGCTCTTAGC AATAGGCTCT
TTACAAGCAT GTGGAACGTA TTTTTTGATA ACACTTGCTG GAAAAATAGA AAATGGTTTT
GCCTATAATG TTAGAAATGC GTCATTTAAA AAGCTTCAAT CTTTATCGTT ATCATTTTTC
GATAATACAC AAACGGGTTT TCTCATTTCG CGCGTGATGT CTGATGTTCA AAAAGTCAGT
TCAGTTATGT CATGGCAGAT AGTTGATGGA GTTTGGGCTA TTTCTTCTAT GACGTTTATT
TTAATTTACT CTTTCTTACT TAGTTGGCAA CTTACACTTT TCATACTTTT TGCAATTCCA
TTGATTGCTT TTGTCGGTTG GTATTTCCAA AGAAAAATAC TTAAACAATA CAGAATTGTC
AGAAAGCTTG TTTCAGAAGT GACGGGTATA TACAATGAAG GACTGATGGG TGCAAAAACA
GTAAAGGTAT TGTCTGTTGA AGATTTGGTA TCGAAAGATT TTAAAAAACA TACAGATGAG
CTGAAAAATG CTTCGATAAA AGCTACCATT CTTTCAGGAA TGTACACTCC GATAGTTATT
TTCATCGGTA ATATAGTCAC AGCTCTTATT CTTGTGTACG GAGGAAAGAG AACGTACATA
AATGTTTTAA GTATCGGTAC TTTGAGTGCA GCTATTTCTT ATTCCATCCA ATTTTTCGAG
CCAATATATC AACTTGCAAG AGTATTAGCT GACCTTATAT CAGCTCAAGC AGCTGCCGAA
AGAGTTCTCG AACTCATCGA AACTGAACCT GAGATATTGG ATACCCCTGA TGCCATTGAC
GTAGACATTC AAGGGGAATT GGTTTTTGAT AATGTATCGT TCAAATATTC AAAAGGTGAC
TGGGTTATTA AATCGTTTAA CTTAAAAGTT CGTAAAGGGG AAACAATCGC TCTTGTAGGT
GATACCGGTG CTGGAAAAAC AACGATAGTA AATTTAATAG GCAGGTTTTA CGAACCAACT
CAAGGTACGA TATACATAGA TGGCGTAGAT TACAGAAAAA TCAAAATAAA AAAACTGAGA
GAAAGCATAG GCTATGTACT TCAAACACCG CATTTATTTA ATGGGACTAT CGCTGAGAAC
ATAAGATACG GTAGGCTAGA TGCAACAATG GAAGAAATAA TAGAAGCGGC AAAATTAGTA
AATGCCCATG ATTTTATAAT GAAATTGGAG AATGGGTATG AAACAAACGT TGGTGAAAGC
GGTGCGAATT TATCACTCGG TCAAAGACAA CTTATTTCAC TTGCGAGGGT TGTGATTGCT
AATCCGAAGA TTTTAGTATT AGATGAAGCA ACAAGCTCTA TAGACACATA TACGGAACAT
TTAATACAAG ACGCTATTCA CAAACTGCTA AAAGGAAGGA CAAGCTTTGT CATAGCCCAC
AGATTATCCA CTATAAGGAA CGCCGATAAG ATATTGGTTA TTGAAAATGG GGAAATAATA
GAAGAAGGTA CACATGAACA ATTGATGAGG AAAAAAGGAA AGTATTACAG ATTGTATATG
AACCAATTTG TACAAGAGAA AGAAAAAGAG ATATTGGGAG AGAAAGAGCA GGTTTAG
 
Protein sequence
MEEIIQERQT KFNPKLWAKF WIFLKEYKFH FIFLIIIMIL VGLIDATYPY LTKYAIDNFI 
ARKNLNGFSK YFILLLAIGS LQACGTYFLI TLAGKIENGF AYNVRNASFK KLQSLSLSFF
DNTQTGFLIS RVMSDVQKVS SVMSWQIVDG VWAISSMTFI LIYSFLLSWQ LTLFILFAIP
LIAFVGWYFQ RKILKQYRIV RKLVSEVTGI YNEGLMGAKT VKVLSVEDLV SKDFKKHTDE
LKNASIKATI LSGMYTPIVI FIGNIVTALI LVYGGKRTYI NVLSIGTLSA AISYSIQFFE
PIYQLARVLA DLISAQAAAE RVLELIETEP EILDTPDAID VDIQGELVFD NVSFKYSKGD
WVIKSFNLKV RKGETIALVG DTGAGKTTIV NLIGRFYEPT QGTIYIDGVD YRKIKIKKLR
ESIGYVLQTP HLFNGTIAEN IRYGRLDATM EEIIEAAKLV NAHDFIMKLE NGYETNVGES
GANLSLGQRQ LISLARVVIA NPKILVLDEA TSSIDTYTEH LIQDAIHKLL KGRTSFVIAH
RLSTIRNADK ILVIENGEII EEGTHEQLMR KKGKYYRLYM NQFVQEKEKE ILGEKEQV