| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1297 |
|---|
| Symbol | |
|---|
| ID | 5451863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1399469 |
|---|
| End bp | 1400392 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640875073 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001410801 |
|---|
| Protein GI | 154249976 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1683] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTCC ATAACAAACC AAATTTAATT GTGAGCAGGT GTTTTTTTGA ACACACACGT
TACGATGGTG GAATTATTTC GAGTGATATT GTAAAAAAGC TTGAAAATTA CTGCAATTTT
GTAACCATCT GCCCAGAAGT CGAAATCGGT TTACCTATAC CAAGAGAACC AATAGATGTG
TTTTTAATCA ACAATGATTA CAAACTTATG AATAAATCTC ATAATATCGA TTTAACAGAA
AAGATGCTGA GCTTTGCAAA TAAATTTGCT CAAAATGTTT CTACCTTAGA AATCGATGGA
ATGATTTTAA AAGCCAAATC GCCTTCGTGC GCGATAAACG ATGCGAAATT GTATGGCCCA
AATGGTAGAG TCATATCAAA AACGCCGGGA ATTTTTGCAA AGGTGATGAT TGAGAAATTT
ACAGAGTTAA TGATTGAAAG TGAGATGAGA CTTACAAACG ATAAAATCAG ATTTGAATTC
TTGACTTTCA TTTTTACACT TGCACGCTTT AGAGACGTGA AAACAAAAAA GGAACTTATC
GATTTTCATT CAATCAATAA GTTCCTTTTA CTTACAAAAA ATGAAAAGAT TATGAGAGAG
CTTGGAAGAA TAGTTGCACA AAAGGAATTT AACGAGAACG TTCTGAAAGA ATATCGTGAA
TTTTTAATAA AAGCCCTTAA AACTCCCATT AAAAATTCAA AAGTTATAAA CACACTACTT
CACATGTATG GATTCTTCAA AGACAAATTA AATGAGAAAG AGAAAGCATA CTTCATGGAT
TTAGTGGAGG ATTATAAAAA CAATCTTATA AGTTTGCAAT CAATAATGGT TTTGCTAAAA
TCTTGGGCTA TACATTATAA TATAAATTAC ATTCTTAATC AAACTTTCCT TGAGCCTTAC
CCAAAAGATC TTGAAAACAT TTGA
|
|---|
| Protein sequence | MPFHNKPNLI VSRCFFEHTR YDGGIISSDI VKKLENYCNF VTICPEVEIG LPIPREPIDV
FLINNDYKLM NKSHNIDLTE KMLSFANKFA QNVSTLEIDG MILKAKSPSC AINDAKLYGP
NGRVISKTPG IFAKVMIEKF TELMIESEMR LTNDKIRFEF LTFIFTLARF RDVKTKKELI
DFHSINKFLL LTKNEKIMRE LGRIVAQKEF NENVLKEYRE FLIKALKTPI KNSKVINTLL
HMYGFFKDKL NEKEKAYFMD LVEDYKNNLI SLQSIMVLLK SWAIHYNINY ILNQTFLEPY
PKDLENI
|
|---|
| |