| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1293 |
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| Symbol | |
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| ID | 5452658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1394510 |
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| End bp | 1396063 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640875069 |
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| Product | phosphodiesterase |
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| Protein accession | YP_001410797 |
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| Protein GI | 154249972 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000703284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATGGT TGATATATAT AGTTATATTA TTTGTTGGAA TAGCGGCAGG TGCGTTTTTT
GGCATTTCGG TTGGAAGAAA AAGAGCGGAA GAAGCTTTGG AGAAAAAGCT CAAAGCAGCT
AAAGAAGATG CTGAAAGCAT AATTAAAAGT GCAGAAAAAG AAGCAAGTGA AATAAAGAAA
AAGGCTATAA TCGAAGCGCG TGAGGAAGCT CATCAAATTC GCGAAGAAAT AGAAAAAGAA
AGAAAAAAGC GAGAAGAAGA GATAAAGCAA CTCGAAGAAA GATTGCTTAA ACGTGAAGAA
ATGCTGAGTA AACGCGAAGA GCTTATCGAT AAAAGGGAAA ATTATGTGGA AAATTTAAAA
ATAGAGCTCG AATCTAAAGC CAAAGAGATA GAAGAAAAGG CAAAGGAAAT CGAGAGGAGA
TTTATAGAGC TCGCTGGTAT TACACATGAA CAAGCAAGAG AAATAGTACT TCAAGAGGCG
AGAGAAAAGT ACGAACATGA AATTGCTAAA TTCTTTGTCC AGATAAAGAC AAGATACGAG
GATGAAGCCG ATAAGTACGC TAAAAAAATC ATTGCTGATG CTATTCAAAG ATATGCACCA
GAATACATAG GTGAAGTAAC GATTAGCACT GTTGCTTTGC CAAATGACGA CATGAAAGGT
AGATTGATAG GTAGGGAAGG TAGAAACATA AGGACATTTG AAAAGATAAC AGGTGTGGAC
CTTATAATAG ATGACACACC AGAAATGGTT ACTTTAAGCT CGTTTAATCC ATTAAGAAGA
GAAGTTGCGA GAAGAACTAT CGAAAAACTA GTTCAAGATG GTAGAATACA CCCAGCAAGG
ATAGAAGAGA TGTACGAAAA AGCTAAGGCA GAAGTTGAAA GAGAAATAAA AGAAGCAGGA
CAAGACGCGG TTATAACAGT TGGTGTTGGA GGTTTACATC CAGAGATTAT CAAATTGCTT
GGTAGATTGA AATTCAGAAC AAGCTACGGT CAAAATGTGC TAGCACATTC GGTGGAAGTT
GCACAAATCG CAGGTTTGCT TGCAGCCGAA TTAGGTTTGA ATGTAGACAA AGCCAAAAGA
GGAGGCTTAC TCCACGATAT AGGTAAGGCG ATAGATCACG AAGTCGAAGG TTCACACACC
GATATAGGTG CTGAAATGTT GAAAAGATAT GGTGAGTCTG ATGAGATAAT TAATATGGTT
ATGGCACACC ATGGTCAAGA AGAACCAATA ACACCAGAAG CGGCTATAGT AGCTGCTGCG
GATGCAATTT CAGCAGCGAG ACCTGGGGCA AGGCGTGAAG ACGTCGAAAA TTACATCAAA
CGTTTGATGA AACTTGAAGA AATTGCAAAG AGTTACAAAT ATGTTGAAAA TGCGTACGCA
ATACAAGCTG GTAGGGAAAT AAGAGTTATA GTCCAACCAG ATAAAACGGA CGATGCGACA
ATAGAGAAAC TTGCGCACGA TATAGCAACA AGAATAGAAA ACGAACTACA ATATCCCGGT
GTATTGAAAG TTGTAGTTAT AAGAGAAAAA AGATCGGTTT CTTACGCTAA GTGA
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| Protein sequence | MEWLIYIVIL FVGIAAGAFF GISVGRKRAE EALEKKLKAA KEDAESIIKS AEKEASEIKK
KAIIEAREEA HQIREEIEKE RKKREEEIKQ LEERLLKREE MLSKREELID KRENYVENLK
IELESKAKEI EEKAKEIERR FIELAGITHE QAREIVLQEA REKYEHEIAK FFVQIKTRYE
DEADKYAKKI IADAIQRYAP EYIGEVTIST VALPNDDMKG RLIGREGRNI RTFEKITGVD
LIIDDTPEMV TLSSFNPLRR EVARRTIEKL VQDGRIHPAR IEEMYEKAKA EVEREIKEAG
QDAVITVGVG GLHPEIIKLL GRLKFRTSYG QNVLAHSVEV AQIAGLLAAE LGLNVDKAKR
GGLLHDIGKA IDHEVEGSHT DIGAEMLKRY GESDEIINMV MAHHGQEEPI TPEAAIVAAA
DAISAARPGA RREDVENYIK RLMKLEEIAK SYKYVENAYA IQAGREIRVI VQPDKTDDAT
IEKLAHDIAT RIENELQYPG VLKVVVIREK RSVSYAK
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