Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1291 |
Symbol | recA |
ID | 5451991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1393016 |
End bp | 1394089 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640875067 |
Product | recombinase A |
Protein accession | YP_001410795 |
Protein GI | 154249970 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0260339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATG AAATGAAAAA AGATGTTTTA AAAAAAGCTA TAAGCAAAAT TGAGAAGACT TATGGTAAAG GTTCTATAAT GGTTCTTGGT GAAGGCAACC TTGTTCAGGA AATAGATGTA ATACCAAGTG GCTCGTTGGC AATTGATATA GCGTCAGGTG TTGGTGGATA CCCAAGAGGC AGGATTATAG AAATATATGG CCCTGAATCA AGTGGTAAGA CTACCATCGC TCTTCATGCC ATCGCATCGG TTCAGAAACT CGGAGGAATA GCAGCTTTTG TTGACGCAGA ACATGCTCTT GATTTAAACT ATGCAAAGAA CCTAGGTATA GACCTTTCGG AATTACTTGT TTCTCAACCA GATTACGGTG AACAAGCGCT GGACATTGTT GATGAACTTG TAAGGAGTAA CGCTGTTGAT TTGATAGTTG TCGATTCTGT AGCTGCTTTA GTGCCAAGGG CGGAAATTGA AGGTGCAATG GGTGATGCAC AAATAGGTTT GCAAGCAAGA CTTATGTCTC AGGCTTTGAG AAAATTGGCA GGAAATGTCA ATAAATCAAA AGTTGTGGTT ATTTTTATCA ACCAAACGCG TATGAAAATA GGTGTCATGT ACGGTAACCC TGAAACAACA ACAGGTGGAG TTGCCCTGAA ATTTTACGCA ACAATGAGAA TAGAAGTAAG ATCTGCCGGG AAAATTGTGG AAGGTAACGA ACATATAGGT AATGAAGTGA ATATTAAATT CGTGAAAAAC AAGGTTGCAC CACCATTTAG AACAGCAAGT GTTGATATAA TATACGGAAA GGGTATAGTC CGAGAAAACG AACTGTTTAA TATAGCAGTC AATGAAGGTT TGATAGATAG GAGAGGAAGT TGGTTTACTT ACGAAGATCT TAGTGGCAAG GAACACTCTC TTGGACAAGG TAAATCTAAT GCTGTTAATT ATCTTGTTGA ACATTCAGAA GTTGCCGATG AAATTGAAAA GAGAATTAGA GAAAAGTATT TAGCAAAACC AGATCAAGTA TCTCAAGAGA AAGATGGAGA AAATGAAAAA TTACAAAAAC AAGCAACAAA GTGA
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Protein sequence | MSDEMKKDVL KKAISKIEKT YGKGSIMVLG EGNLVQEIDV IPSGSLAIDI ASGVGGYPRG RIIEIYGPES SGKTTIALHA IASVQKLGGI AAFVDAEHAL DLNYAKNLGI DLSELLVSQP DYGEQALDIV DELVRSNAVD LIVVDSVAAL VPRAEIEGAM GDAQIGLQAR LMSQALRKLA GNVNKSKVVV IFINQTRMKI GVMYGNPETT TGGVALKFYA TMRIEVRSAG KIVEGNEHIG NEVNIKFVKN KVAPPFRTAS VDIIYGKGIV RENELFNIAV NEGLIDRRGS WFTYEDLSGK EHSLGQGKSN AVNYLVEHSE VADEIEKRIR EKYLAKPDQV SQEKDGENEK LQKQATK
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