Gene Fnod_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1291 
SymbolrecA 
ID5451991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1393016 
End bp1394089 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content38% 
IMG OID640875067 
Productrecombinase A 
Protein accessionYP_001410795 
Protein GI154249970 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0260339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATG AAATGAAAAA AGATGTTTTA AAAAAAGCTA TAAGCAAAAT TGAGAAGACT 
TATGGTAAAG GTTCTATAAT GGTTCTTGGT GAAGGCAACC TTGTTCAGGA AATAGATGTA
ATACCAAGTG GCTCGTTGGC AATTGATATA GCGTCAGGTG TTGGTGGATA CCCAAGAGGC
AGGATTATAG AAATATATGG CCCTGAATCA AGTGGTAAGA CTACCATCGC TCTTCATGCC
ATCGCATCGG TTCAGAAACT CGGAGGAATA GCAGCTTTTG TTGACGCAGA ACATGCTCTT
GATTTAAACT ATGCAAAGAA CCTAGGTATA GACCTTTCGG AATTACTTGT TTCTCAACCA
GATTACGGTG AACAAGCGCT GGACATTGTT GATGAACTTG TAAGGAGTAA CGCTGTTGAT
TTGATAGTTG TCGATTCTGT AGCTGCTTTA GTGCCAAGGG CGGAAATTGA AGGTGCAATG
GGTGATGCAC AAATAGGTTT GCAAGCAAGA CTTATGTCTC AGGCTTTGAG AAAATTGGCA
GGAAATGTCA ATAAATCAAA AGTTGTGGTT ATTTTTATCA ACCAAACGCG TATGAAAATA
GGTGTCATGT ACGGTAACCC TGAAACAACA ACAGGTGGAG TTGCCCTGAA ATTTTACGCA
ACAATGAGAA TAGAAGTAAG ATCTGCCGGG AAAATTGTGG AAGGTAACGA ACATATAGGT
AATGAAGTGA ATATTAAATT CGTGAAAAAC AAGGTTGCAC CACCATTTAG AACAGCAAGT
GTTGATATAA TATACGGAAA GGGTATAGTC CGAGAAAACG AACTGTTTAA TATAGCAGTC
AATGAAGGTT TGATAGATAG GAGAGGAAGT TGGTTTACTT ACGAAGATCT TAGTGGCAAG
GAACACTCTC TTGGACAAGG TAAATCTAAT GCTGTTAATT ATCTTGTTGA ACATTCAGAA
GTTGCCGATG AAATTGAAAA GAGAATTAGA GAAAAGTATT TAGCAAAACC AGATCAAGTA
TCTCAAGAGA AAGATGGAGA AAATGAAAAA TTACAAAAAC AAGCAACAAA GTGA
 
Protein sequence
MSDEMKKDVL KKAISKIEKT YGKGSIMVLG EGNLVQEIDV IPSGSLAIDI ASGVGGYPRG 
RIIEIYGPES SGKTTIALHA IASVQKLGGI AAFVDAEHAL DLNYAKNLGI DLSELLVSQP
DYGEQALDIV DELVRSNAVD LIVVDSVAAL VPRAEIEGAM GDAQIGLQAR LMSQALRKLA
GNVNKSKVVV IFINQTRMKI GVMYGNPETT TGGVALKFYA TMRIEVRSAG KIVEGNEHIG
NEVNIKFVKN KVAPPFRTAS VDIIYGKGIV RENELFNIAV NEGLIDRRGS WFTYEDLSGK
EHSLGQGKSN AVNYLVEHSE VADEIEKRIR EKYLAKPDQV SQEKDGENEK LQKQATK