Gene Fnod_1289 details

Gene Information

• Locus tag: Fnod_1289
• ID: 5452039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 1391875
• End bp: 1392435
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640875065
• Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
• Protein accession: YP_001410793
• Protein GI: 154249968
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0558] Phosphatidylglycerophosphate synthase
• TIGRFAM ID: [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.819659
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATAAGG AGAATTCGAC GACTTCAAGG AAATCTGTTT TTAACATTCC GAACACAATA 
AGTTGGTTAA GGATAGCTCT CACTGTTGTG ATAGTTTTGC TAATGTATTT TGGAAAAAAC 
TTACTCGCGT TTGTGTTTTT CTTAATTGCG TCTATCAGCG ATTATTTCGA TGGTTACTTA 
GCCAGAAGGC TAAAACAAGT TACAAGTCTT GGTAAAGTAC TCGATCAAAT GAGTGATAAA 
ATATTAATCA CATCGATTCT TGTTGTTTTT GTAGAACTCC ATATTGTACC AAGTTGGCTG 
GTTGTTATAA TTATTTTAAG AGACACACTC GTTAGTGTTG TTAGAATGTT AGCGTCAGAA 
TCTGGAAGAA TCGTTGCGGC AAATATCTTT GGAAAATTGA AAACAGTGTC TCAGATGATA 
CTTACGATAG GACTGTATAT CCAGCTCTTG GGTTTTCGGA TAGAAGTGTT CACCACAGTA 
TTAATTTACT TTGTGGCTGT TGTAACGGTA CTTTCTGGAG TTATTTATCT TTACCAAAAT 
CGAGAATTTC TCAATAAGTA A 

 

Protein sequence

MNKENSTTSR KSVFNIPNTI SWLRIALTVV IVLLMYFGKN LLAFVFFLIA SISDYFDGYL 
ARRLKQVTSL GKVLDQMSDK ILITSILVVF VELHIVPSWL VVIIILRDTL VSVVRMLASE 
SGRIVAANIF GKLKTVSQMI LTIGLYIQLL GFRIEVFTTV LIYFVAVVTV LSGVIYLYQN 
REFLNK