| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1288 |
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| Symbol | |
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| ID | 5452884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1390587 |
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| End bp | 1391882 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640875064 |
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| Product | MiaB-like tRNA modifying enzyme YliG |
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| Protein accession | YP_001410792 |
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| Protein GI | 154249967 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTTTTT TGAAATTATA TGTAATTGTT CTTGGTTGTG CCAAAAACGA GGCGGATTTT
TCACTTTTTA AGTACCATTT GAAACAGTTA GGTCATGAAG TAGTTGATGA TGTTGAAGAT
GCAGATGGTG TTGTTATAGA TACTTGTGGT TTTATAGTGG ATGCCAAGCA AGAGTCTATC
GATACAATAT TAGAGTTTGC AAGTATTAAA AAACAAAAGC CCGATTTCAA AGTATATGTA
ACTGGCTGTT TAGTTCAAAG ATACCCCAAA GATTTGCCAT TGGAAATACC GGAGGTTGAT
GGCTGGTTTG GAGTTATTCC TCCAAAGAAT TTGGCTGAAA GTATTAACAA AACAAAAAAA
TATATAACAG ATCCTGTGGC AGTTTATGAG TTTGAGGGAA GAGTTGATAG TGATTTACCT
TATGCGTATG TGAAGATAGC AGATGGATGT GATAGAGCGT GTACTTTTTG TACAATACCA
AAGTTCAAGG GGGGTTTTGT AAGCAGAAAA CTGGAAGATA TAGAAAAGGA AGTAAGATAT
TTAATTGAAA ATGGTAAGAA AGAGATAGTC CTTGTGGCAC AAGATACGAC AGGTTACGGT
GTAGATTTAT ATGGTAAGCA AATGCTTCCA GAGCTTCTTA AAAGAATTAA CGATATTGAT
GGAAACTTTT GGATTCGTGT TATGTACATG CACCCTGACC ACGTAACTGA TGAAATTCTA
AAAGGTTTTT CATACGAAAA AGTTGTTAAA TATTTTGATA TACCAATCCA ACACAGTAGT
GATAATATAC TTAAACTAAT GGGAAGAACG AAAAGTACGA AAGAACTTGA GGAATTATTC
GATAAAATAA GAAGTTTATA TCCTCAAGCG GTTTTGAGAA CCAGTATAAT TGTTGGTTTT
CCTGGTGAAA CAAAAGATGA TTTTGAGCAA CTGATAGATT TTATAAGAAC TATTGAATTT
GATAGGCTTG GTGGATTTGT GTATTCCGAC GAAGAAGACG CCGCATCGTA TAATTTACCT
AATAAAGTTT CTTTGAAAAC AGCTCAAAAA AGGTTAGACA CTTTGATGGA AGTTCAGGCT
GAAATTTCGT TTTTAAGGAA TCAAAGATTG GTTGGAAAAG TTATCGATGT TTTGTTTGAA
GAAGAAGTTA ACGGAGTAAT CATCGGAAGA AGTTACATGG ATGCTCCTGA AGTTGATGGG
AATGTTTTTG TAAAAGGTCA CGGAATTAAC AGGTTTGGTA AGGTAAAGAT TACAGAAGCA
GATACTTACG ATTTGGAGGG GGAATTGGTT GAATAA
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| Protein sequence | MAFLKLYVIV LGCAKNEADF SLFKYHLKQL GHEVVDDVED ADGVVIDTCG FIVDAKQESI
DTILEFASIK KQKPDFKVYV TGCLVQRYPK DLPLEIPEVD GWFGVIPPKN LAESINKTKK
YITDPVAVYE FEGRVDSDLP YAYVKIADGC DRACTFCTIP KFKGGFVSRK LEDIEKEVRY
LIENGKKEIV LVAQDTTGYG VDLYGKQMLP ELLKRINDID GNFWIRVMYM HPDHVTDEIL
KGFSYEKVVK YFDIPIQHSS DNILKLMGRT KSTKELEELF DKIRSLYPQA VLRTSIIVGF
PGETKDDFEQ LIDFIRTIEF DRLGGFVYSD EEDAASYNLP NKVSLKTAQK RLDTLMEVQA
EISFLRNQRL VGKVIDVLFE EEVNGVIIGR SYMDAPEVDG NVFVKGHGIN RFGKVKITEA
DTYDLEGELV E
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