Gene Fnod_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1285 
Symbol 
ID5453060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1388201 
End bp1388935 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content34% 
IMG OID640875061 
Producthypothetical protein 
Protein accessionYP_001410789 
Protein GI154249964 
COG category[S] Function unknown 
COG ID[COG1656] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTGA AGGTATCCAT AAGAATATTT GGATCTTTGT CTGATTTAAC TAAGGGAGTT 
TACTATTTTG AGATTAATCC TGGAGTAGGT CAAACAATAA AAGATTGTAT TGAACGCCTC
GGTATTCCAC ATACCGAGGT TTATTTTATT ACTTTAAACG GTAATTTTGT AGATTTTTCT
AAGATTGTCG AAGATGGTGA TTTTTACTGT GTTTATCCTC ATTGCAATCT AGAAATCGAT
GAGAACTATT CTTTAACTCC TAGATTCAAA GGAGAACCAA GATTTGTTTT GGATATACAT
TTAGGAAAGC TTTCGAAATT GCTCCGAATG TTTGGTATAT ACGCTGAGTA TGGTTTAGTT
GACGATTTTC AAATAGTTGA TAGAGCAAAG AAAATTGGTG GAATAATACT TACAAGAGAC
AGAAAACTTC TTATGCGAAG AGATATCGTT TATGGTTATA TAATTCGAAG CGATTTTCCA
GAAGAGCAGT TAAAAGAAGT TTTTGAAATG TACGAGCTTA TGAATTGGGT GAAGCCTTTC
TCACGTTGCT TGGAATGCAA TGGGGAGTTA GTCGTTGTTG ATAAGGAATC TGTTTCTGGT
AGAGTTCCTC CACGTGTTTT TGAGATGCAT GATGAATTTG CTATGTGCGG TAATTGTGGA
AAAATCTATT GGAGAGGAAC GCATTACGAG CATATGGCAG CTTTAATAAA TGAATTTATA
AAACAAATTC AATGA
 
Protein sequence
MRLKVSIRIF GSLSDLTKGV YYFEINPGVG QTIKDCIERL GIPHTEVYFI TLNGNFVDFS 
KIVEDGDFYC VYPHCNLEID ENYSLTPRFK GEPRFVLDIH LGKLSKLLRM FGIYAEYGLV
DDFQIVDRAK KIGGIILTRD RKLLMRRDIV YGYIIRSDFP EEQLKEVFEM YELMNWVKPF
SRCLECNGEL VVVDKESVSG RVPPRVFEMH DEFAMCGNCG KIYWRGTHYE HMAALINEFI
KQIQ