Gene Fnod_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1278 
Symbol 
ID5453004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1380550 
End bp1381785 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content36% 
IMG OID640875054 
Producthypothetical protein 
Protein accessionYP_001410782 
Protein GI154249957 
COG category[S] Function unknown 
COG ID[COG3681] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAGT TTTTAGAAGG AGAGAATTCA AAAAGAAGTA TAATCAGGGA GATATTTTTC 
GATAATGTAA AATTATCGTA TGGCTGCACG GAACCTGTTG CTGTAGGTTT GTCGGTTGCC
GTTGGGAAAG GGTATTTGAG GGGTGTATTG AAAAGCATAG ATGTGATAAT GGACAGAAAT
ACATATAAAA ATGGTTTAGA AGTAGGTATA CCTGGTACTC ACTTACATGG ATTTGACCTC
GCAATAGCTC TTGCGTATCT TGTAGGAAAA CCAGAATATG GCTTGCAAGT TTTCAAAGAT
GTGAATTCAC ATGTACTTTC AAAAGCTTAT GAATTGAAAG ATAAAATAAG AGTTAGCTAT
GAGAATTCGT ATAATCTCCA TATCAAAACA AAGCTTGAAG CAGATAACGA AGTGTTGATT
GAAATAACTG ATTCACATGA TAATATTAGC AAAATAGTTG TTGATGGGAA TGAAATAAGA
AACACTCAAA CGAGTGTTAA TTTTAAGAAA GATTTGGTTA AATCAATTTC TTTGAACGAT
ATCTTTGAAT ACATTGAAAA TCCTGATTTA GATGTTGTAA ATGTTGTAAA AGAAGGCATA
AAATACAATG TTAACGCTGC AAGGGAAGGA ATAAAAAAAG AAGGGAATTT TGGATATGCA
CTGGAAGAAG GAATACCCGC ATATGTTGCT GCTGGTGTTG ATGAGAGAAT GAATGGCGAA
TTGATACCAA TAATGACTGT AGCTGGTAGT GGTAATCAGG GTATAGCATC GATAGTTCCC
CCAACATTGT ACGGTAGGGA AAATGAAATG CCAGAAGAAA AAATAGAAAA GGCAGTTTTG
TTAAGTATTC TTGTAACAAC TTACATAAAA GCGTTCACAG GTGTTTTAAC ACCTGTGTGC
GGTGCAGGAT CCATAGCATC AGCTGGCAGT AGTGCTGCAA TAACTTACCT TGCAGGTGGT
AACGCTGAGC AAATAAAAAA TGCTATAAAT AACGTTTTAG CGACGCTTTT TGGTATGACT
TGCGACGGAG CTAAACGAGG CTGTGCACTG AAAGCAAGTA TAGGTACACA AATGGCACTG
AACGCTTCAA AATTGGCGCT TAAAGACACA AATATACCAT GTGGAAATGG CTTTGCTGCA
AAAGATGTTG AAGAAACTAT TAGAAGAATT GAACTATTAA CAAAATCTCT AAGGCAATTT
GACCAAGATG TCATTGATTT TATTGGTCAT TGTTAG
 
Protein sequence
MSEFLEGENS KRSIIREIFF DNVKLSYGCT EPVAVGLSVA VGKGYLRGVL KSIDVIMDRN 
TYKNGLEVGI PGTHLHGFDL AIALAYLVGK PEYGLQVFKD VNSHVLSKAY ELKDKIRVSY
ENSYNLHIKT KLEADNEVLI EITDSHDNIS KIVVDGNEIR NTQTSVNFKK DLVKSISLND
IFEYIENPDL DVVNVVKEGI KYNVNAAREG IKKEGNFGYA LEEGIPAYVA AGVDERMNGE
LIPIMTVAGS GNQGIASIVP PTLYGRENEM PEEKIEKAVL LSILVTTYIK AFTGVLTPVC
GAGSIASAGS SAAITYLAGG NAEQIKNAIN NVLATLFGMT CDGAKRGCAL KASIGTQMAL
NASKLALKDT NIPCGNGFAA KDVEETIRRI ELLTKSLRQF DQDVIDFIGH C