| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1271 |
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| Symbol | |
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| ID | 5452695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1371910 |
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| End bp | 1373121 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640875047 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001410775 |
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| Protein GI | 154249950 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGGTATTTG AATACAAAGG TGTAGATAGG TCTGGAAGAA AATTAAAAGG TATAATTCAA
GCTGAAAGCG TTAAAGAAGC ACTTGATAGA TTAAGAGAGC AAGGAATAAT TATAACAGAT
CTTGTTCAGA AAGGTGAAAA AACTAGAAGC AGTTCAACGG GAAAGAAAAA AGCAGTCTTT
CAAGCAAAAT TAAAGGATAT AGTTTTGTTT GCAAGGCAAT TAGAAACGAT GATTTCTGCA
GGCATTAGGC TTGCCGATGC CGTTATAACT CTTTCAGAAC AAGAAGTTTT TTCAAAAAAG
TTTAGAATAG CATTGAAAGA AGTTGCTTCT GATATGAAAG CTGGTGTTTC TTTTTCAGAT
GCACTTGAAC GTCAAGGTAT TTTTGATTCT ATATTTATAA ACATGGTAAA AGCAGGTGAA
GAAGGCGGTA TATTAGATGT AACAATGAAA AAAGTAGCAA ACTATTATGA GAGTGTAAAT
AGATTAAGGG AACAGGTAAA ATCTTCTATG GCATATCCTA TGTTTATATT GGGCTTTGCT
GTGGTGGTTG TTATAGTTAT TTCTGTCTTT ATTCTTCCAA GATTAATATC TGTCTTTGGA
ACGGTTCCTC AAAGTGGTGT CCTTGGGATG CTAATGAAGA TGAATTATAT ATTCACAAAA
AAATGGTACA TTTTGGCACC AGTTGTTATC GCGGTTGGTT ATGGTTTGAA GGTTTTTCTT
GATACTGTTT ACGGTGCTTA TGTAAAAGAT TTTATCGGTA ACCTTATTCC GCCGATAAGA
AAGTTAAGAC AAAAAATGTC GAATGAGAGA TTTACGCGTA CGCTAGGTGT TCTTATAGGT
AGTGGTGTTC CTATGGTAAA TGCTTTGGAT ATGGCAGCGA AAGCATCTAA TAATCCAAGA
TTTATATCAA TAATTTCAAA GGTCATAGAA GAAGTAAAGG CTGGTAGTAA TTTGAAAGGA
GCTTTAAAAC GTGCTGGAAT TTTTCCTCAA ATAGTTTACG AAATGGTTGG AACAGGCGAA
GAAACAGGTA AACTAGATGT TGTTATGGAG AAAGTTGCAG ATTTTTATGA GGAAGAAATT
CTTAGTGATA CAAAAAAACT TGTTAGTTTA ATTGAACCGG CACTAATTGC TTTTGTTGGT
TTGTTTATAG CATTCATCGC CTTTACTATG TACTCAACGA TCTTCCAAAT GCAAGGACAG
TTTGGTAGGT GA
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| Protein sequence | MVFEYKGVDR SGRKLKGIIQ AESVKEALDR LREQGIIITD LVQKGEKTRS SSTGKKKAVF
QAKLKDIVLF ARQLETMISA GIRLADAVIT LSEQEVFSKK FRIALKEVAS DMKAGVSFSD
ALERQGIFDS IFINMVKAGE EGGILDVTMK KVANYYESVN RLREQVKSSM AYPMFILGFA
VVVVIVISVF ILPRLISVFG TVPQSGVLGM LMKMNYIFTK KWYILAPVVI AVGYGLKVFL
DTVYGAYVKD FIGNLIPPIR KLRQKMSNER FTRTLGVLIG SGVPMVNALD MAAKASNNPR
FISIISKVIE EVKAGSNLKG ALKRAGIFPQ IVYEMVGTGE ETGKLDVVME KVADFYEEEI
LSDTKKLVSL IEPALIAFVG LFIAFIAFTM YSTIFQMQGQ FGR
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