Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1258 |
Symbol | |
ID | 5451694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1358978 |
End bp | 1359553 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640875034 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_001410762 |
Protein GI | 154249937 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000105467 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAAT CTTCAAAGTT AACAACGGCT ATCATTGTAC TAATTCCTGT AGCAGTTGGT ATCAATTATG CTGGTAAGTT CTTTGCCGAA GCTTTAAAGT TACCTCTTTG GCTTGATTCA ATTGGTACAA TACTTGCAGC CATGCTTGCA GGTCCTGTCG TAGGTGGTTT TAGTGGCGCG ATTAACAACA TCATATATGG CTTGACTGCT GGACCAATTT CTTTTGTATA CGCGCTCACA AGCATAGGTA TAGGTGTTGC CGCTGGGTTA CTTTACAAAG CCAAGATGTT TAAAAATGCT TTTAGAGCTT TACTGAGCGG TCTTATCATT GCCATTGTTG CAACCGCTAT TTCTGTGCCT CTTAACGTTA TCTTTTGGGA AGGTCAAACG GGTAATGTTT GGGGAGATGC ACTCTTTGGA TTTTTAAGGT CAAGAAATGT TGGTGTATGG CTCGCTTCGT TCTTTGATGA GTTGGTAGTG GATCTTGTTG ACAAAGTACT TTCCGTTTTT GTGGCTTTTG GTATATTTAA AGCATTGCCA AAAACTTTAA TTTATACTTT CAGAGGAGAG GAATAA
|
Protein sequence | MAKSSKLTTA IIVLIPVAVG INYAGKFFAE ALKLPLWLDS IGTILAAMLA GPVVGGFSGA INNIIYGLTA GPISFVYALT SIGIGVAAGL LYKAKMFKNA FRALLSGLII AIVATAISVP LNVIFWEGQT GNVWGDALFG FLRSRNVGVW LASFFDELVV DLVDKVLSVF VAFGIFKALP KTLIYTFRGE E
|
| |