| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1242 |
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| Symbol | |
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| ID | 5451601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1340373 |
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| End bp | 1341395 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640875018 |
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| Product | heat-inducible transcription repressor HrcA |
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| Protein accession | YP_001410746 |
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| Protein GI | 154249921 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0655276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTA CAGAACGCCA AAAAAAGATA CTTTACTGCA TTGTTCAGGA TTACATAAAC
ACAAAAACTC CGGTAAGTTC TAAACGTGTG CTTGAGAGCG CTATTATAGG GCGTTCTGGC
GCAACTATAC GAAATGATAT GAATAGGCTT ATGAGGGCTG GTTACATTTA TCAACCACAC
ACATCCGCTG GAAGAGTTCC TACCGACAAA GGGTTACGTT TTTACGTTAG TGAATTGAAA
AAAATACGTG ATGAAATAAA GTCGAAAAGC ACACATGTTG ACACAGCGGC TAATTTTCCA
ATAGGTGATA TGGAAAAAGT TCTCACCGGC GCGGCAAAAT TGCTAAGCTC TTCAACTAAA
GGCATGGTAA TTATAGAAAA ACCAAATCCT CTAAACCTAA GAGTAAAGAG AGTTGTAATT
ACACCTGTTA GTAAGAATTT TTCAATAGTG AATATAGTTA CCTCGCTTGG TTTAAGCTCT
TCAATACCAC TTCAACATGG CGAAATTGAA AATGTAGCAC ACGTTGAGGA AATACTTAAC
AAGGTTATCT CTGGACTTAC TTTGAATGAG TTTAAAACAA GAATTAAAGA AATAATATCC
AAGATAAATA ATTTCAAAGA ATTCGATTTT TCAGAAATGG GGAAAGGGTT TTTGGAAATA
ACTGAGAGAT TGTCTATGGA GAGATACGAA GATTACATTT CAGAAGGACT GTATAATTTG
TTGTCTAATG ACAGAATAAA CCTTAAGAAG TTGCAAAATA TACTTGGCTA TGTTTCCAGT
GAAGATTTTT ACAAAGACGT TTTTGAATTG GAAAGCGATA TATACATAGG TAAAGAACAT
AGCTTAAGAT TTTTAGATGA TTTCTCAGTA ATTTTAGGTG ATTTTTACGC AGAATCAACA
CCAATTGGAC GTATCGCTGT TATATTTGAC AAGTATGGAA AGTACGATCA AATAATAGAT
AGCTTTGAAT TCATGCTTAA CAGATTGACA GAATACTTCA CAGTTGTATC AAGAAATGTG
TAA
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| Protein sequence | MDITERQKKI LYCIVQDYIN TKTPVSSKRV LESAIIGRSG ATIRNDMNRL MRAGYIYQPH
TSAGRVPTDK GLRFYVSELK KIRDEIKSKS THVDTAANFP IGDMEKVLTG AAKLLSSSTK
GMVIIEKPNP LNLRVKRVVI TPVSKNFSIV NIVTSLGLSS SIPLQHGEIE NVAHVEEILN
KVISGLTLNE FKTRIKEIIS KINNFKEFDF SEMGKGFLEI TERLSMERYE DYISEGLYNL
LSNDRINLKK LQNILGYVSS EDFYKDVFEL ESDIYIGKEH SLRFLDDFSV ILGDFYAEST
PIGRIAVIFD KYGKYDQIID SFEFMLNRLT EYFTVVSRNV
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