| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1240 |
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| Symbol | |
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| ID | 5452241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1337341 |
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| End bp | 1338738 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640875016 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001410744 |
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| Protein GI | 154249919 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000394663 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGGT ACTCAAGAGT ATTTTTAATG ATGTTTTTAC TTTTGTTTTC CATCAGCATC
TTTGCGAAGG CAACGATAAC AGTTTCTGTG TGGAGTTGGA ATGTTGACAG GTACAAGAAG
CTTATCGCGG AGTTTAATAA GTACTATCCG GATATAGAAG TTAAATTGGT TGTAAACGAG
CCGGAAGTAA ACAGTTTTCT TACAGCAAGA GCCTCTGCTA AGCAGGTTTT ACCAGATGTT
ATAGCCGAAT CTTGGGAACC ATTATCATAT CCTGTCTCAC AAGGTTGGGT TTATCCATTA
GATGAATTTT TAAAAGATGA CCCATATATA AAGTATGTTC CAAATAGTGT GCGAAACGCA
TTTAAGTACA ATGGTAAAAC ATATGCCTTG GGTGAAAGGT TACATTTCGA ATGTATTGTT
TTGAATCTTG ATTTGCTTAA GAAACTCAAC TTACAAGTTC CAAAGTATGA AGAATGGACA
GTTGATCTTT TCAAAAATTA TGCCAGAAGA GCTACAACGA GAGAATATTC AGGAATAAAT
CAGCTTTGGG AATTTGATAC TTTTATGGCG GCCGTACTTA GTGACCACAC TACATTTTGG
AGTTTTGATC CAGAGAAATG GGAATTTGAT CTTGTAAAAG GTGGATGGAT ACCTGCTATT
AAGCTTCAAA AAGAGCTTAA ATCTATACCA GGTCTTGTTT CAGACGATAT GATTAATCAA
GAAGCACGAA ACAAAGGAGA GCTTGACGAT TATCAAAAGA AGTTTGGTAA AGACGCGGAT
GCTTTCAGAG AGTCAAAAGT TCTTATGGGG TTTGAAGCAA CGTACGATTG GAGCTGGCTA
AGAACAGTAC CTTGGAATTT TGATTATTAC CCACTTCCTT ACGATCAAAA GATTGGTCAG
AGGTTTCCTG TACATGTTAA TTATACATTC GTTACCTCAA CAACAAAATA TCCGAAAGAA
GCGTTCTTAT TCGCAAGATT TCTCACATAC GATCCAAGAG GAGTTGTAGC AAGATTAAAA
CTCTTTGAGT CTGAAGGTGA AGAAAAAGGA AGACTTATCG ATTGGTTCAT ACCTGCCACA
ATGCACCCAG ATGTTATAAA TTATTTCGAA AAAATGAAGA TACCAAATGG GATTAAGTAT
ATGCTTAAGA ATCTTGATAA GACCGTTAGA GTTGATATGT GGAAGGTAGT ACCGGGATGG
GTTGAAGTTA TTTGGGATAT TATATTCCCA GTCAACGAGA AAATCAGAGC AGGTGCAACT
CAACCTGAAG CTGTTGCAGC AGAGACTCAA GAAAAAGCTA ATAAGGTTAT AAAAGAATCA
TGGACTATTT TCCAGAAAAA ATTAGCGGAA GCCGAAAAGA AATTTCCACA AATAAGAAAA
CAAATTGAAG GAAAGTAA
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| Protein sequence | MKRYSRVFLM MFLLLFSISI FAKATITVSV WSWNVDRYKK LIAEFNKYYP DIEVKLVVNE
PEVNSFLTAR ASAKQVLPDV IAESWEPLSY PVSQGWVYPL DEFLKDDPYI KYVPNSVRNA
FKYNGKTYAL GERLHFECIV LNLDLLKKLN LQVPKYEEWT VDLFKNYARR ATTREYSGIN
QLWEFDTFMA AVLSDHTTFW SFDPEKWEFD LVKGGWIPAI KLQKELKSIP GLVSDDMINQ
EARNKGELDD YQKKFGKDAD AFRESKVLMG FEATYDWSWL RTVPWNFDYY PLPYDQKIGQ
RFPVHVNYTF VTSTTKYPKE AFLFARFLTY DPRGVVARLK LFESEGEEKG RLIDWFIPAT
MHPDVINYFE KMKIPNGIKY MLKNLDKTVR VDMWKVVPGW VEVIWDIIFP VNEKIRAGAT
QPEAVAAETQ EKANKVIKES WTIFQKKLAE AEKKFPQIRK QIEGK
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