| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1226 |
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| Symbol | gatB |
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| ID | 5452081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1320852 |
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| End bp | 1322291 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640875002 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001410730 |
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| Protein GI | 154249905 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAAT TTGATAGATA CCGTCCTGTA ATAGGCCTTG AAATACACGT TCAATTAAAC
ACTAAGACGA AAGCTTTTTG TAATTGTAGT GCAGACGTTT TTGATTTAGA ACCAAATACA
GCTATATGCC CTGTCTGTAC GGGTCAACCA GGTGCATTAC CTGTTCCTTC GCAAGAAATG
TACGATTTAG GTACGAAGCT TGCATTAGCG TTAAATTGTA AGATAAACGA ATATACAAGA
TTTGATAGAA AAAATTACTT TTATCCAGAT CTTCCAAAGG GTTATCAAAT AACACAGTTT
TTTTACCCGC TGGCAGAATA TGGTTATCTT GAAGTTAAAG GTAAAAAAAT CAGGATAAGA
AGGATTCATC TCGAAGAGGA TGCTGGTAAA CTACTCCATT CTGGAGACAG TATTACCGAA
GCTGACTATT CTTTAGTTGA TATGAACCGC TGTGGAATAC CTCTTGCTGA AATTGTTACA
GAACCAGACA TTGAGTCTCC AGAAGAGGCA AGAATATTTA TGGAAAAACT TAGGACATTA
CTTAGATACT TAGAAGTTAG TAGTGGTGAT ATGGAAAAAG GTGCAATGAG GTGTGATGCG
AATATATCGG TTATTGATGT TCAAACAGGA AAGCAGAGTA ATAAAGTCGA AGTGAAAAAT
ATGAACTCTT TCAAATTTGT TGAAAAGGCT CTTGAGTATG AATTCGAAAG AATTGTATCG
TTGATGAAAG AAGGAAAAGA AGTGGAAAGA GAAACAAGAG GATGGAATTT AAGTACAAAA
TCTACTGTCA GTATGAGAAG TAAAGAAGAA GCTCACGATT ATAGGTATTT CCCTGAACCG
GATATACCTC CCATCGTTTT AACCAAGGAG TATATTGAGA AAATAAGAGG TACATTATCA
GAATTACCAG ATGAACGCTT GAAAAGATTT GTTAGAGAAT ATCAACTATC TGAGAAAGAT
GCTTGGGTTT TTGTTGAGGA TAAGGAAATT GCTGATTTTT ATGAAGTAGT TGTTGCTAAA
ACAAAAGAGC CGAAAGAGAC TGCTAATTGG TTTTTAACAG AACTATTCCG TTTGTACTCC
GAACATGGGA AAGAAAAAGT AAAAGTTCAA CCGGAACATT TTGTTGAACT CTTTGATTTG
ATAAAGAATG GAACCATTTC AAGAAACATC GCTAAAGAAG TGTTTTCAGA GTGCGCTTTA
AGTGGTAAAT TGCCAAGTGA ATTAGTTGAA CAGAAGGGTT TAAAGCAAGT TGATGACGTA
GCTTTGATTG AAGAAATAGC AAAAAAAGTC ATTGAAAGTA ATCCGCAGCA GGTAGAAGCA
TTTAAAAAAG GCAAAGAAGG ACTTTTTGGA TTTTTCGTTG GTCAGGTCAT GAAAGAAACA
AAAGGTAAGG CAAATCCAAA AACTGTCAAT GATATACTCA ACAAATTACT CCGTGGATAG
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| Protein sequence | MSQFDRYRPV IGLEIHVQLN TKTKAFCNCS ADVFDLEPNT AICPVCTGQP GALPVPSQEM
YDLGTKLALA LNCKINEYTR FDRKNYFYPD LPKGYQITQF FYPLAEYGYL EVKGKKIRIR
RIHLEEDAGK LLHSGDSITE ADYSLVDMNR CGIPLAEIVT EPDIESPEEA RIFMEKLRTL
LRYLEVSSGD MEKGAMRCDA NISVIDVQTG KQSNKVEVKN MNSFKFVEKA LEYEFERIVS
LMKEGKEVER ETRGWNLSTK STVSMRSKEE AHDYRYFPEP DIPPIVLTKE YIEKIRGTLS
ELPDERLKRF VREYQLSEKD AWVFVEDKEI ADFYEVVVAK TKEPKETANW FLTELFRLYS
EHGKEKVKVQ PEHFVELFDL IKNGTISRNI AKEVFSECAL SGKLPSELVE QKGLKQVDDV
ALIEEIAKKV IESNPQQVEA FKKGKEGLFG FFVGQVMKET KGKANPKTVN DILNKLLRG
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