Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1186 |
Symbol | |
ID | 5452969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1275694 |
End bp | 1276881 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640874957 |
Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
Protein accession | YP_001410690 |
Protein GI | 154249865 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCAAAT CTAATTATAT CACTGAACTT TTAAAATCGA AAGATATTAT TCTTCACCAA ATGAATGAGA ATGAAAGTGA AATAGAACTT CACATAAGTC AGGTACAAAA GCCCCACAAA TGTCCTAAAT GTGGTAATAT TACAAGTAAG GTACATGATT ATCACACACA GAAGGTAAAA GACGTACCTA TAATGGGCAA GAAAACATAT TTGATTATAA GAAAGAGAAG ATATGTCTGC AAAGCATGTG GGAAGAAGTT TTTTGAACAC ATAAGTTTTT TAGGCAAATC TCAAAGGATG ACAAATAGAC TTGCAGCATA TATTATAAGT CAACTTGGAA GTTTAACAAG TATGAAGGAG GTAGCAAAAT ACACAAATGT TTCAGTGACA ACAGTTATGA GATTGTTTGA TAAAGTAAAT CCAGGTCAAA CTGTAGATGA GTTTTCTTCT GAAGCAATAT GTGTAGACGA GTTTAAAGGC AATGCAGGTG GAGCAAAATA TCAATGTATA TTTGTAGATC CTGTAAAAGG GCAAATAATC GAGATTTTGA AAGATAGAAA GCAAAATATT TTAATTGAGT ATTTTAAGAG GCTGAAAGGT AGAGATAAAG TAAAATATTT TATCTGTGAT ATGTGGAGAC CATTTGTAGA GGTAGCAAAA ACATATTTTA AAAACGCTAA AATAGTGATA GACAAATTTC ATTTTACCCG ATACGTTTAT TGGGCTTTAG AAAATGTGAG GAAAAGGGTA CAAAAGGAAT TAGGAAGTAA TTTGAGGAGA TATTTTAAGA GGAGTAGGAA GTTGTTATTG AAGAATTATG AAGAACTTGA GCCTGAGCAA AGAGAAGAAT TAGAAGTAAT GTTTTGGTAT AGTCAAGATT TGAGGAAAGC CCATCAACTC AAAGAAGAAT TTAAGAGAGT GTTAAAGAGC AGTAATTCTG AAGAAGCAAG ACTCGTATTA AAAAAGTGGA TAGAGAGAGC AGAGCAAAGT GGACTTTCTG AATTTATGAG ATGTGTAAAG GTTTTTAGGA GCTGGTTTTC TGAGATAGTA AATGCATTTG ATGTTCCATA TACGAATAGT ACGACAGAGG GTTTTAACAA CAAGATAAAA GTATTAAAGA GGAATGGATT TGGATACAGG AATTTTGAAA GATTCAGGAA GAGGATTTTG TACAGTTGTG GTAGATAA
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Protein sequence | MLKSNYITEL LKSKDIILHQ MNENESEIEL HISQVQKPHK CPKCGNITSK VHDYHTQKVK DVPIMGKKTY LIIRKRRYVC KACGKKFFEH ISFLGKSQRM TNRLAAYIIS QLGSLTSMKE VAKYTNVSVT TVMRLFDKVN PGQTVDEFSS EAICVDEFKG NAGGAKYQCI FVDPVKGQII EILKDRKQNI LIEYFKRLKG RDKVKYFICD MWRPFVEVAK TYFKNAKIVI DKFHFTRYVY WALENVRKRV QKELGSNLRR YFKRSRKLLL KNYEELEPEQ REELEVMFWY SQDLRKAHQL KEEFKRVLKS SNSEEARLVL KKWIERAEQS GLSEFMRCVK VFRSWFSEIV NAFDVPYTNS TTEGFNNKIK VLKRNGFGYR NFERFRKRIL YSCGR
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