Gene Fnod_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1178 
Symbol 
ID5452333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp1267764 
End bp1268495 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content36% 
IMG OID640874949 
Producthypothetical protein 
Protein accessionYP_001410682 
Protein GI154249857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAGCA AAATTTACTT TGCCATTTTG CTGAGTTTGT CTTTTGTCTT ACTTTTTTCC 
ACAGGTTGTA TGAAATTACT CAATATCCAA ATTCCAGATG GAGTTTACGT TGTTGGCGAT 
TGGAACAGCT GGATTCCTAC CGAGAAGGAT CAGATGGCAT TTGATTCAGT AGAAGGATGC 
TACAAATTTG AACTACCAAC CGCTTCGATG ACATTTAAAG CAAGCAGATC AGGAACTGAA 
TACTCAATCG GATGGTATAA GGTTATATAT AAATCTGGTG GAGTAACGAA AGTCTCTGCC 
TCCATTCCTG TTTGGAAGGA AAACTTAAAT TCAGATTCTT TAACTATATA CGCAAGCCCA 
ACAATTATGA TTAACGGACA AGCGGTAGGT GTTGGAGATA CCGAGAAATT TCAAACGAAA 
AAAAGCAAAT GGTACGTTGG TGGAAAATTC AATAGCTGGA ACTTAAGCAA CGGTGAAATG 
ACTTGGGATG ATTCTAAAAA AGTTTTTAAA TATACATTAA CCAACTTCAA TGCAAATGAA 
AAAAGTTACC AGTTCAAAGT AACAAGAAAC ATGGGTGGTT GGAAACCTTG GGAATTCAAT 
TACGACGGCA AAAAATACGA TGCAGGATTT GACAATAACA CACTATCTCT AGAAAGTACG 
GGTCAAGTAG ACATAGAAAT AACTTTTAAT CCAAAGTTTT CACTCATTGA AGCAATAGCA 
ACTCCAAAGT AA
 
Protein sequence
MKSKIYFAIL LSLSFVLLFS TGCMKLLNIQ IPDGVYVVGD WNSWIPTEKD QMAFDSVEGC 
YKFELPTASM TFKASRSGTE YSIGWYKVIY KSGGVTKVSA SIPVWKENLN SDSLTIYASP 
TIMINGQAVG VGDTEKFQTK KSKWYVGGKF NSWNLSNGEM TWDDSKKVFK YTLTNFNANE 
KSYQFKVTRN MGGWKPWEFN YDGKKYDAGF DNNTLSLEST GQVDIEITFN PKFSLIEAIA 
TPK