Gene Fnod_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1172 
Symbol 
ID5452051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1260750 
End bp1261751 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content38% 
IMG OID640874943 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001410676 
Protein GI154249851 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCAA AAAACAATAG AAACAACGTA TTACTTGAAG TCAAGAACTT AAAAAAGTTC 
TTTGCATCAG AGAGAGCTCT CTTTTCGAGA GCCAAGCACT TTGTCCATGC TGTTGATGAC
ATCTCTTTTG AAATAAAAGA AGGAGAATCT TTAGGATTAG TTGGAGAATC TGGATGTGGT
AAAACAACTA CGGGTAGGAT GGTCGTAAGG TTAGAACAAC CAACGGAAGG AACAATAAAA
CTACTTGGAA AACCAATTGA AGAATACGAA AGAATGGAAT ACCACGCACA AGTCCAAATG
ATATTCCAAG ACCCATACGA ATCACTAAAT CCAAGAATGA CAATATTCGA TATAATTGCC
GAACCTTTGA ATATTCATAA TGTTGGAACT TTAGAAGAAA GAGAAGAAAA AGTATCAAAC
TTGCTCCAAG AAGTTGGACT AACACCTCCA GAAAGCTTTT TGTGGAGATA TCCGCACGAA
TTATCTGGTG GTCAAAGGCA AAGAGTCGCA ATAGCACGTG CACTTATATT AAATCCAAAA
CTAATCGTCG CCGATGAGCC AACATCAATG CTTGACGTTT CTGTAAGAAC AGGTGTTATG
CACCTCATGA TGGAACTCCA ACAAAAGCAC AATATGAGCT ATTTGTATAT CACACACGAC
CTTGCTGTTG CAAGATACAT GGTTAACAGA ATCGCTGTTA TGTACCTTGG TAAAATAGTT
GAACTTGCTG AAACGGAAGA ACTGCTTCAC AATCCTATGC ACCCGTATAC AAGAGCACTC
ATGGACGCTG TTCCAGTTCC AGATCCAGAA TATAAAAGAG CTGAACCAAA CATAATTGGA
AACATAAGCG TTCCAATAGA CCCACCACCA ATTTGTAGAT TTTACGATAG ATGCCCATTC
AAAGAAGAAC GTTGTAAAAC TGACCCGCAT CCAGAATTAA AAGAAGTAGC ACCAGGACAT
TTTGTTGCTT GCTATCCTGT ACAAGAAGGA AAACTTAGAT AA
 
Protein sequence
MSSKNNRNNV LLEVKNLKKF FASERALFSR AKHFVHAVDD ISFEIKEGES LGLVGESGCG 
KTTTGRMVVR LEQPTEGTIK LLGKPIEEYE RMEYHAQVQM IFQDPYESLN PRMTIFDIIA
EPLNIHNVGT LEEREEKVSN LLQEVGLTPP ESFLWRYPHE LSGGQRQRVA IARALILNPK
LIVADEPTSM LDVSVRTGVM HLMMELQQKH NMSYLYITHD LAVARYMVNR IAVMYLGKIV
ELAETEELLH NPMHPYTRAL MDAVPVPDPE YKRAEPNIIG NISVPIDPPP ICRFYDRCPF
KEERCKTDPH PELKEVAPGH FVACYPVQEG KLR