| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1154 |
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| Symbol | lysS |
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| ID | 5452179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1241787 |
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| End bp | 1243316 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874925 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001410658 |
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| Protein GI | 154249833 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTTAAGG ATTTTAGAGA AGCAAGGATT AAAGAAATAG ATGAACTTCG TAATTTAGGA
ATTAACCCTT ATCCGTATTC TTACAATAAA ACACATACAA CGGAAGACAT CAAAAAGCAG
TTTGAACATC TTTCTAACGG TGAAGTAACC GATAAAAGAG TTTCAACTGC TGGTAGAATA
ATGTCAATAA GGGAACACGG AAAAAGTGCT TTTTTCCATA TAAAGGATAC ATATGGAAGA
ATCCAAGCTT ACATTAGAAA AGACAAAACA GAGAATTACG AATTTTTCAA AGAGCGTGTC
ACAGTTGGTG ATATAGTTGG TGTTGAAGGT ATAGTATTTA AGAGCAATAC TGGTGAAATC
ACCATACTTG TGGAAAAGTT TGAACTTCTG GTTAAACCTT TAAGACCAAT GCCTGAAAAA
TGGCACGGTA TAAAGGACAA GGAAGTACTT TACAGGCAAA GATATGTTGA TATGATTGCA
AACGACGAAA CAATTAAGAG ATTTAGAATG AGATCGGATA TTATAAGGAT GATTAGAGAG
TTTCTTACAA AGAAAGGATT TTTTGAAGTT GAAACGCCAA TACTTCAATA CCTTACGGGT
GGTGCATCTG CAAGGCCATT TATTACACAT TTAAATGCTC TTGATATAGA CATGTATCTT
AGAATTGCCA CGGAATTACA CCTTAAGAGA TTTATAGTCG GAGGTTTTGA TAAGGTTTAC
GAGATTGGTA AAATATTCAG AAACGAAGGG ATTTCCTACA AACATCACCC AGAATTTACA
TCAATAGAAC TTTATCAAGC TTACGCTGAT TACGAAGATA TGATGAACCT TACGGAAGAA
CTTATAACAT ACCTTGTTGA GCAACTATAC GGTACAACTA AGATAACATA TCAAGGTCAA
GAGATTGATT TTACAAGACC TTGGAGAAGA GTAAAGATGA GAGATTTCAT AAAAGAAAAT
CTTGGTGTTG ATATCATAGA AGATAGTGAT GAAACAATGG CAAAAGTGCT TGCAGAAAAT
GGAGTGGAAG TTGATATAAA CGATAGAGGC CATATGATAG AGAAACTTTG GGATCTTGTT
GAAGACAAAG TTATTCAACC AACGTTCTTA CTCGAACATC CTGTTGAAAT ATCACCACTT
GCCAAAAAGC ACAGAGAAGA TCCAAGGGTA ACGGAAAGAT TTGAACTTAT AATTTATGGT
AGAGAAATGG CCAATGCATT CAGTGAATTG AACGATCCTG TTGACCAACT TGAAAGATTT
ATGAACCAAC TGAGACTTAG AGACCTTGGC GATCAGGAAG CTCAAATGCT AGATAAAGAC
TTTGTAAGAG CTCTGGAATA TGGAATGCCA CCAACTGGAG GACTCGGAAT AGGAATAGAT
AGATTGGTAA TGCTGCTTAC AGACAGTGCT AATATAAGGG ACGTTATAGC ATTCCCACTT
GTGAGACCAG AAGGAGATAT AGATATTGAA GATTACACCG ATTTAGAAAA ATCTGAAATC
ATAGAAAAAG AAGGGGGAAA TAAAGCATGA
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| Protein sequence | MLKDFREARI KEIDELRNLG INPYPYSYNK THTTEDIKKQ FEHLSNGEVT DKRVSTAGRI
MSIREHGKSA FFHIKDTYGR IQAYIRKDKT ENYEFFKERV TVGDIVGVEG IVFKSNTGEI
TILVEKFELL VKPLRPMPEK WHGIKDKEVL YRQRYVDMIA NDETIKRFRM RSDIIRMIRE
FLTKKGFFEV ETPILQYLTG GASARPFITH LNALDIDMYL RIATELHLKR FIVGGFDKVY
EIGKIFRNEG ISYKHHPEFT SIELYQAYAD YEDMMNLTEE LITYLVEQLY GTTKITYQGQ
EIDFTRPWRR VKMRDFIKEN LGVDIIEDSD ETMAKVLAEN GVEVDINDRG HMIEKLWDLV
EDKVIQPTFL LEHPVEISPL AKKHREDPRV TERFELIIYG REMANAFSEL NDPVDQLERF
MNQLRLRDLG DQEAQMLDKD FVRALEYGMP PTGGLGIGID RLVMLLTDSA NIRDVIAFPL
VRPEGDIDIE DYTDLEKSEI IEKEGGNKA
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