| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1139 |
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| Symbol | rpsJ |
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| ID | 5452965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1223993 |
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| End bp | 1224301 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640874907 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001410643 |
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| Protein GI | 154249818 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000305109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAGGTC AGAAAATTAG AATAAGGTTG AGGGCTTATG ATCATAGATT ACTTGACGAA
TCAGCCAAGA AAATAGTTGA AGTTGCAAAG CAAACAAATG CAAAGGTATC GGGACCAATA
CCATTGCCAA CAGAAAGGTC GCTTTACGTA GTGCTTAGGT CACCACTCAA GCACAAAGAC
TCACGTGAGC AATTTGAGAA AAAGGTACAC AAGAGACTGA TTGATATAAT TGAACCGAAC
TCAAAGACGA TTGACGCTCT GATGAAGATT AATCTTCCAG CAGGTGTCGA CGTTGAAATC
AATCTGTGA
|
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| Protein sequence | MPGQKIRIRL RAYDHRLLDE SAKKIVEVAK QTNAKVSGPI PLPTERSLYV VLRSPLKHKD
SREQFEKKVH KRLIDIIEPN SKTIDALMKI NLPAGVDVEI NL
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