Gene Fnod_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1124 
SymbolrpsH 
ID5452998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1217081 
End bp1217485 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content37% 
IMG OID640874892 
Product30S ribosomal protein S8 
Protein accessionYP_001410628 
Protein GI154249803 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.176656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGAGCG ATCCAATAGC TGACATGCTT ACAAGAATAA GAAATGCAAA CCAAGTTTTT 
AAAGAACAAG TAGATGTTCC TGCATCAAAC TTAAAAAAAG CAATAGCTGA TATTCTTGTT
AGGGAAGGAT TTATTAAGGG ATACACATAC ATTGAAGATG GAAAACAAGG AATTTTGAGA
ATTCAAATGA AATACAAAGG TACAAGAAAG AACAGAGAAA GAGTAATTCA TGGAATTGTT
CGTGTTTCGA AACCTGGGAG AAGGATTTAT GTTGGTAAAA ACAATATCCC AAGAGTTAAA
AATGGACTCG GTATTGCCAT AATATCCACA TCAAAAGGCG TACTCACCGA CAAAGAAGCA
GCGGAACATG GAGTCGGTGG AGAAGTTATT GCCTACATCT GGTAA
 
Protein sequence
MWSDPIADML TRIRNANQVF KEQVDVPASN LKKAIADILV REGFIKGYTY IEDGKQGILR 
IQMKYKGTRK NRERVIHGIV RVSKPGRRIY VGKNNIPRVK NGLGIAIIST SKGVLTDKEA
AEHGVGGEVI AYIW