Gene Fnod_1123 details

Gene Information

• Locus tag: Fnod_1123
• Symbol: rplF
• ID: 5452412
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: -
• Start bp: 1216513
• End bp: 1217067
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640874891
• Product: 50S ribosomal protein L6
• Protein accession: YP_001410627
• Protein GI: 154249802
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.611465
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACGTA TTGCGAAGAA ACCAATTGTT TTACCAACAA ATGTTCAGTT ATCAATCACC 
GACTCTGAGA TAAAAGTTAA AGGCCCAAAG GGTGAATTGA AATTAAATAA TCATCCATTT 
GTTTCTATAA AAGTCGAAGG TAATGAAGTT TGGGTTACAC CAAATCTTGA AGTAGCAAAG 
AGAAAAGCAG ATGAGAGAAA ATTCAAAGCA ATGGTCGGTA CTTACTGGAG ACTTATCAGA 
AACATGGTTT TAGGTGTTAC GGAAGGATTT AAGAAAGAAC TTGAAATTGT TGGCGTCGGT 
TACAGGGCAC AACTTCAAGG AAATAAGTTA ATCATGAACC TCGGTTATGC TCACCAAGTA 
GAATTCGATG TACCAGCTGA TGTAAAAGTA GAAGTCCCCG CACCAAATAA GATAATTGTT 
AGTGGAATCG ATAAACAGAG AGTTGGACAA GTTGCAGCAG ATATACGCAA GTGGAGAGAA 
CCAAATCCAT ACAGTGGTAA AGGTATAAAG TATGTAGACG AGGTTCTCAA ACTTAAAGAA 
GGAAAGAAAG CATAA 

 

Protein sequence

MSRIAKKPIV LPTNVQLSIT DSEIKVKGPK GELKLNNHPF VSIKVEGNEV WVTPNLEVAK 
RKADERKFKA MVGTYWRLIR NMVLGVTEGF KKELEIVGVG YRAQLQGNKL IMNLGYAHQV 
EFDVPADVKV EVPAPNKIIV SGIDKQRVGQ VAADIRKWRE PNPYSGKGIK YVDEVLKLKE 
GKKA