Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1115 |
Symbol | |
ID | 5452421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1211903 |
End bp | 1212175 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640874883 |
Product | translation initiation factor IF-1 |
Protein accession | YP_001410619 |
Protein GI | 154249794 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0361] Translation initiation factor 1 (IF-1) |
TIGRFAM ID | [TIGR00008] translation initiation factor IF-1 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000159264 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTTATC TGAAAAACAA GGAAGACGTC ATACGAATGG AAGGAACAAT AGTTGAAGCA CTACCAAATG CTATGTTCAG AGTACAACTC GACAACGGTT TTAAAGTGCT CGCTCATGTT TCTGGTAAAA TGCGCAAAAA CTTTATAAGG CTTGTACCAG GTGATAGGGT AGTCGTTGAA CTTACAATCT ACGACCTCAC TCGTGGAAGA ATAGTTTACA GAAAGAAACT TGACTCAAAG GGCGAAGAAG AGATACTAGA TGACGACGAA TAA
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Protein sequence | MIYLKNKEDV IRMEGTIVEA LPNAMFRVQL DNGFKVLAHV SGKMRKNFIR LVPGDRVVVE LTIYDLTRGR IVYRKKLDSK GEEEILDDDE
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