Gene Fnod_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1115 
Symbol 
ID5452421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1211903 
End bp1212175 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content40% 
IMG OID640874883 
Producttranslation initiation factor IF-1 
Protein accessionYP_001410619 
Protein GI154249794 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000159264 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTATC TGAAAAACAA GGAAGACGTC ATACGAATGG AAGGAACAAT AGTTGAAGCA 
CTACCAAATG CTATGTTCAG AGTACAACTC GACAACGGTT TTAAAGTGCT CGCTCATGTT
TCTGGTAAAA TGCGCAAAAA CTTTATAAGG CTTGTACCAG GTGATAGGGT AGTCGTTGAA
CTTACAATCT ACGACCTCAC TCGTGGAAGA ATAGTTTACA GAAAGAAACT TGACTCAAAG
GGCGAAGAAG AGATACTAGA TGACGACGAA TAA
 
Protein sequence
MIYLKNKEDV IRMEGTIVEA LPNAMFRVQL DNGFKVLAHV SGKMRKNFIR LVPGDRVVVE 
LTIYDLTRGR IVYRKKLDSK GEEEILDDDE