| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1096 |
|---|
| Symbol | |
|---|
| ID | 5452799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1194292 |
|---|
| End bp | 1194963 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640874864 |
|---|
| Product | phosphoribosylformylglycinamidine synthase I |
|---|
| Protein accession | YP_001410601 |
|---|
| Protein GI | 154249776 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
|---|
| TIGRFAM ID | [TIGR01737] phosphoribosylformylglycinamidine synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.125068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTC CCATACCAAA AGCACAAGTT GTAGTTTACC CGGGAAGTAA CTGTGATAGG
GATGCTCTGT GGGCGCTAAA ATATGTTGGA TTCGATGCCG ATTTTGTTGA TATACACGGA
AATATCGACG CAGACCTTGT GATCTTACCT GGAGGATTTT CTTACGGAGA CTATTTAAGA
GTCGGTGCAG TTGCTGCCAG AGAACCAATT GCCTATAAAC TTAGAGAGTT TGTGAGCCGT
GGGGGGCTTG TTATAGGTAT CTGTAACGGT TTTCAGATAC TCGTTGAGAT GGGGTTGTTA
CCAGGGGCTT TGCTCCAAAA TTCCTGTGGG CATTTCTTGT GTAATATCGT CGAACTTGAA
GTTGTCGATA ACACAACACC GTTCACAAGC TATTTCCAAC AAGGTGAGGT AATTAAATTA
CCAATAGCAC ACGGATTTGG AAGGTACGTT AAAGTCGATG GCGCACAGAC TGTCTTTAGA
TACACAAAAG ATGTCAACGG TTCAGATGAA TTAATCGCTG GGATAACAAA TAGTTCAAAA
AATATCTTGG GATTGATGCC ACATCCAGAG CGGGCCATCG AAAAAATTCT CGGTTCAGAT
GATGGCTTAA GAGTATTTCT GAGTGTGTTC AATTACATAA AAGACCAGAA AAAAGAAGGT
GTTGTGATAT GA
|
|---|
| Protein sequence | MSIPIPKAQV VVYPGSNCDR DALWALKYVG FDADFVDIHG NIDADLVILP GGFSYGDYLR
VGAVAAREPI AYKLREFVSR GGLVIGICNG FQILVEMGLL PGALLQNSCG HFLCNIVELE
VVDNTTPFTS YFQQGEVIKL PIAHGFGRYV KVDGAQTVFR YTKDVNGSDE LIAGITNSSK
NILGLMPHPE RAIEKILGSD DGLRVFLSVF NYIKDQKKEG VVI
|
|---|
| |