| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1064 |
|---|
| Symbol | |
|---|
| ID | 5451692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1160036 |
|---|
| End bp | 1161319 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640874832 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase |
|---|
| Protein accession | YP_001410569 |
|---|
| Protein GI | 154249744 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTA GCGAGATGGG TAACCTCAAG CCATTTGGAC CACTATACGA AAATGCTCAA
AAGCAGTTCT TAAAGGCAGC AGACCTTATG AACCTAGATC CAAACATTGG AAATTTCTTA
CTCTGGCCAC AAAGGATTTT AGAAGTTCAC TTTCCAGTAG TAATGGATGA TGGAAGAGTT
GAAATATTTG AAGGTTACAG AGTACAACAC AATACAGCAA GAGGACCAGC GAAAGGTGGA
ATAAGATACC ACCCAGATAC AAATCTTGAC GAAGTTGCAT CACTTGCATT CTGGATGACA
TGGAAATGTG CAGTTATGAA CCTTCCATAC GGTGGCGGTA AGGGTGGAGT TAGAGTAGAC
GTTACAAAAC TTTCCGAAAA AGAACTTGAA AGGCTAAGCA GAAGATTCTT CTCCGAAATT
CAGATGATGG TTGGACCACA AAAAGATATT CCAGCTCCAG ACGTAAACAC GAACGCGAAG
ATAATGGCAT GGTACATGGA TACATACAGT ATGAATGTTG GCTACACGGC TCTTGGTGTT
GTTACTGGTA AACCACTTGA CCTTGGTGGC TCAGACGGAA GACCGGAAGC AACAGGTAGA
GGAGTTTCCA TTGTAGCAAA CGAGGCATGT AAAGCTCTTG GAAAAGATAT ATCAAAAGCA
ACAGTAGCAA TTCAAGGTTT TGGTAACGTT GGTTCATACA GTGCAAAGAT ACTCAGTGAA
GAATTTGGCG CCAAGATAGT CGCAGTTAGC GATGTAAGTG GTGGAATTTA CAACGAAAAT
GGACTTGACA TAAATGATGT GATAGCTTAC AGAGATGCCA ACAAAGGACT TATAAAAGGA
TATCCAAAAG CAAAACCAAT CACAAACGAA GAACTTCTTG AACTTGATGT TGACATACTC
GTTCCAGCCG CTCTTGAAAA CGCAATTACA ATTCAAAATG CAGACAAAAT AAAGGCAAGG
ATTATTGTTG AAGGTGCAAA CGGTCCAACA ACACCAGAAG CAGAAGAAAT ACTAATAAAG
AAAGGTGTTC TTATTGTTCC TGACATTCTT GCAAATGCTG GTGGTGTTAC AGTTTCTTAC
TTCGAATGGG TACAAGACCT CCAAACATTC TTCTGGGACA TTGACGATGT TAGAAAGAAA
CTCACAAAGA TGATGGTTAA CGCATTTGCG GAAGTTTACA AGACAAAGGA AAAATACAAT
ACAGACATGA GAACAGCCGC ATATATTGTT GCTATAAGCA GAGTTGCAAA TGCTGTCAAA
GAAAGAGGAT ACTACCCAAT GTAA
|
|---|
| Protein sequence | MKISEMGNLK PFGPLYENAQ KQFLKAADLM NLDPNIGNFL LWPQRILEVH FPVVMDDGRV
EIFEGYRVQH NTARGPAKGG IRYHPDTNLD EVASLAFWMT WKCAVMNLPY GGGKGGVRVD
VTKLSEKELE RLSRRFFSEI QMMVGPQKDI PAPDVNTNAK IMAWYMDTYS MNVGYTALGV
VTGKPLDLGG SDGRPEATGR GVSIVANEAC KALGKDISKA TVAIQGFGNV GSYSAKILSE
EFGAKIVAVS DVSGGIYNEN GLDINDVIAY RDANKGLIKG YPKAKPITNE ELLELDVDIL
VPAALENAIT IQNADKIKAR IIVEGANGPT TPEAEEILIK KGVLIVPDIL ANAGGVTVSY
FEWVQDLQTF FWDIDDVRKK LTKMMVNAFA EVYKTKEKYN TDMRTAAYIV AISRVANAVK
ERGYYPM
|
|---|
| |