| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1057 |
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| Symbol | |
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| ID | 5452495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1151958 |
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| End bp | 1152608 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640874826 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001410563 |
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| Protein GI | 154249738 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03004] ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000168875 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGGAAC TAAACGATTT ACTCAAGAAT TTTCCATATC TACTCTTAGG AGCATGGGAA
ACACTCAAGT TAACAGCATT TTCGGTCGGT ATAGGTCTTA TATTGGGAAC ATTTATCGGT
ATGGGGCGAC TCTCAAAAAT AAAATTAATC AATTACCCAT GTACTGCATA CGTTGAATTT
TTGAGAGGCA CACCTCTACT TGTCCAAATA TCCATAGTAT ATTTCGGCTT ACCGCAACTT
GGTATACAAT TAGCCCCGTA TCCTGCAGCA ATAACGGCTT TAGGATTAAA CAGCGGAGCG
TACATTGCGG AAATCGTTAG GGCAGGAATA CAATCTATCC CCAAAGGTCA ATACGAAGCA
GCTCGTTCAC TTGGATTAAC CCACTGGCAA GCCATGAGAT ACGTCATCCT CCCTCAAGCT
TTTAGGAACA TACTCCCAGC TCTTGGAAAT GAATTCATAA CACTCACAAA AGACAGCTCG
CTTGCTTCTG TAATTGGCGT TTCTGAATTA ATGAGAAGTG GACAATTCGT TATATCAAGA
ACATTCCAAA CATTCTCCAT ATACTTCGGT ATAGCCTTCA TATACTTCAT CATGACATTT
GTCATATCAA GACTTGTCAG ATACATCGAA AGGAGGATGG CAACAGCATG A
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| Protein sequence | MEELNDLLKN FPYLLLGAWE TLKLTAFSVG IGLILGTFIG MGRLSKIKLI NYPCTAYVEF
LRGTPLLVQI SIVYFGLPQL GIQLAPYPAA ITALGLNSGA YIAEIVRAGI QSIPKGQYEA
ARSLGLTHWQ AMRYVILPQA FRNILPALGN EFITLTKDSS LASVIGVSEL MRSGQFVISR
TFQTFSIYFG IAFIYFIMTF VISRLVRYIE RRMATA
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