| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1038 |
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| Symbol | |
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| ID | 5452130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1134625 |
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| End bp | 1135971 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640874804 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001410544 |
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| Protein GI | 154249719 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0516206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAAT CAACCGTCGT TTTTTTGTTA TTTGTACTGT TGGGGATATT AATCGGGGGC
GTTGGATTTT CTAGTATTTT TGTGGAAGAA CGTGTTGACT CTATTGTTGT TACAAGTAAG
TATTTACAAA TTGAAATAGG AAAAGATGGT AATCTTTCTA AAGTTTCTCA CCTTCTTGGT
AGAGCGTTTT TGTTTTATGT TAACGATAAC GATGGTTTTG ATATTTATAA TGAGAATAAT
ATTGAGATTT CAGAAGGCAC ACCTACATAT ACTATAAATT ATGGTGAAAA GGCAGAGAAA
GATAGTTATA AATCATTACA GATAACTTTT GATTATCCAA ATCGGCTGAA AAAAACCTAT
ATATTTGATG ATAAACTTAT AACGTATTCT TATAAGGTAA AGATTGAATC ACCAGATTCA
GTAAAAATTG CGCTTCCATT GATATGGTCA AATGATACGG TTAGATCCGC TATGAACTTC
TTTGTTTCTT TTAGACCTGA TAAAGATTAC GCTTCGATTG TAAAATTTTC CGGTAAGTTA
GATGGTACAA AGGTTGTAGG GAATAGCTTA GAGTTCTTTG TTTATATGGG ACCTTACAAG
AAGACAGTTT TAAAGCATGT TTTTGGAGAA GATAGTGGAA GGCTTATAGA ACTTATCAAA
ACAATTCCTG GTGTTGGTAC ATGGTACAGT TTCATTGCCG ATGGACTTAC CGAGTTTTTC
AATTGGATAA ACACATTTAC AAGAAATTTT GGATTGACGA TTATAGTCTT TACGATAATT
GTAAGGTTAA TATTGTATCC ATTCTACCAT GCGCAGACAA AACAGATGAT TCAAATGAGG
AAACTCCAAC CAGCTGTTGA AGCTATAAAG AAAAAATATA AGGATCCTCA GAAACAGCAA
GAAGAGCTCA TGAAGCTTTA CAAAGAGAAT AAGATAAATC CATCGAGTGG TTGTTTGATG
TTGCTCATAC AATTACCAAT TTTTATGCTC CTTTACGGTG TTATCCAAAG TTATCAAGAA
CTTTTCTCTG TTTCGGGTGG ATTTTTGATT TGGAAGGACC TCTCAGCAGG TGGTTGGGGA
GCAAACTGGT TGTTCCTTAT TATCACTATT CTAACATCCT ATTACCTCGC GCTTATAACA
AGCCAAGATT CAAGAACGGC ATGGCAGCAG ATAATAATGG GTGCCATATT CCCATTCTTC
TTTATTAACT TGCCAAGTGG TATATTCTTG TACTGGACGA TGAACTCTAT CATTCAACTT
GTTATAACAT TCTACATTTA CAAGCGATAC AAAATACAAG GTTTAACACA ACACGAACTT
TGGGGAATAA GGCCGAAGAA AAAATAA
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| Protein sequence | MKKSTVVFLL FVLLGILIGG VGFSSIFVEE RVDSIVVTSK YLQIEIGKDG NLSKVSHLLG
RAFLFYVNDN DGFDIYNENN IEISEGTPTY TINYGEKAEK DSYKSLQITF DYPNRLKKTY
IFDDKLITYS YKVKIESPDS VKIALPLIWS NDTVRSAMNF FVSFRPDKDY ASIVKFSGKL
DGTKVVGNSL EFFVYMGPYK KTVLKHVFGE DSGRLIELIK TIPGVGTWYS FIADGLTEFF
NWINTFTRNF GLTIIVFTII VRLILYPFYH AQTKQMIQMR KLQPAVEAIK KKYKDPQKQQ
EELMKLYKEN KINPSSGCLM LLIQLPIFML LYGVIQSYQE LFSVSGGFLI WKDLSAGGWG
ANWLFLIITI LTSYYLALIT SQDSRTAWQQ IIMGAIFPFF FINLPSGIFL YWTMNSIIQL
VITFYIYKRY KIQGLTQHEL WGIRPKKK
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