Gene Fnod_1037 details

Gene Information

• Locus tag: Fnod_1037
• ID: 5452430
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: -
• Start bp: 1133869
• End bp: 1134549
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640874803
• Product: single-stranded nucleic acid binding R3H domain-containing protein
• Protein accession: YP_001410543
• Protein GI: 154249718
• COG category: [R] General function prediction only
• COG ID: [COG1847] Predicted RNA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.220357
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAGACT TGAAGAGATT AAACTACATT GGAAAGACAG TGGATGATAT TCTTGAGCAG 
TTTAAGATTG ACTATGATGT TTTGGAAGGT GAGTACGAGG TAAACGTTAT TGATAAGGGA 
ACACACGGTA TATTTGGTTT GTTTGCACGT GACGCTGTTG CGGAAATAAC TATTACAAAT 
AAGTATTACG AGAGAAAATT AAAAGACTTT TTGGAGAATA TATTTAAATA CTTCGGTATT 
GATTATTTTA TTGAAGTCAC AAGTAGGGGA AAAACATTTC TTGCTTCATG TCACAGCGAA 
GAGATTGGAA AAATTATCGG TAAGCACGGT AAAGGTTTGG GTGCTCTTCA ACATTTGGCG 
AATATATTCT TAAATAGAAT AACAGATACA AAGGTTACGG TAATTATCGA CGCTGGTAAC 
TACAGAGAAA AAAGAAGAGA GCAACTTAAG CAGATAGTTG AACATGCAAT TGAGAAAGTA 
AGGAAGATTG GAAAGGTCAA ACTTGACCCA ATGTTTGCTT TTGAGAGAAA GATTGTCCAT 
GAGATAGCCA AGAAGTATTC TGATATACAC ACATATTCTG AAGGTTTAGA ACCTTACAGG 
TACGTTGTTA TAGAAAAGAG AAAGGGGGCG CACAGGAATG AAGATAGGAA ACATCAACGA 
AATGCAACCA CAAGAAATTA A 

 

Protein sequence

MIDLKRLNYI GKTVDDILEQ FKIDYDVLEG EYEVNVIDKG THGIFGLFAR DAVAEITITN 
KYYERKLKDF LENIFKYFGI DYFIEVTSRG KTFLASCHSE EIGKIIGKHG KGLGALQHLA 
NIFLNRITDT KVTVIIDAGN YREKRREQLK QIVEHAIEKV RKIGKVKLDP MFAFERKIVH 
EIAKKYSDIH TYSEGLEPYR YVVIEKRKGA HRNEDRKHQR NATTRN