| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1031 |
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| Symbol | |
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| ID | 5452311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1129078 |
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| End bp | 1130004 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874792 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001410537 |
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| Protein GI | 154249712 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGA AAATAATTTC AGGACTCTTA CTCGTTGATA AAGATAAAGG GCCAACATCA
CATGATATAG TTAACAAAGT CAGAAATATT TTCAATGTAA AACAAGTAGG ACACGCTGGA
ACGTTAGACC CATTCGCAAC GGGCTTATTG CTTGTAGGAA TTGGTAAAGC AACTAGACTT
CTTGAATACC TACAAGGCGA AACAAAAGTA TACAAAGTAA AAATGCAATT AGGAATTATC
ACAGACACAT TCGATATAAC CGGTACAGTA ATGGAAGAAA ATAACATTAA CAACTCGGAA
AGGGAAATCA TAGAAGCGAT TAATTCATTT ATCGGCACTT ACAAGCAGGT TCCACCTGCC
TATTCTGCGA AAAAATACCA GGGTAAAAAG TTGTACGAAC TTGCAAGAGA AGGCAAGATA
ATAAATCTTC CACCAAGAGA AGTAACGATA TATGAAATAT CTGATATAAA AATCGAATTA
CCATACGTTG AATTCACAAC AAAAGTCTCC GCGGGAACAT ACATAAGAAG CCTTTGTATG
GATATAGGCT ACAAACTAGG CTGCGGAGCA ACCACAGTTG AATTGAGAAG AACAAAAGTA
GGAAAATTTG ATGTTGGAAA TGCGGTAAGA ATAGATGAAA ACATTGAAAA GGTAAAAGGA
CATGTAATCC CTATGGAAGA AATCTTAGAC TTACCAAAAA TTGTCATCTT AGATAAAACA
AAAGTATACA ACGGAATTCA CCCAAAAGTG GAAGATTTAA TATCATACGA TAATTTCAAA
AAAGATGACT TAGTTCAAAT ATTTGCCGAT GGAAAATTAA TAGCCATCGC AATGGCTGAA
CGTAACTCAA GCTTTATAGA AACACTAAAA AAACAATCGA GAAACGAGCG CATATTAACT
TTGGAAAAAG TATTTAGACT TGATTAG
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| Protein sequence | MEQKIISGLL LVDKDKGPTS HDIVNKVRNI FNVKQVGHAG TLDPFATGLL LVGIGKATRL
LEYLQGETKV YKVKMQLGII TDTFDITGTV MEENNINNSE REIIEAINSF IGTYKQVPPA
YSAKKYQGKK LYELAREGKI INLPPREVTI YEISDIKIEL PYVEFTTKVS AGTYIRSLCM
DIGYKLGCGA TTVELRRTKV GKFDVGNAVR IDENIEKVKG HVIPMEEILD LPKIVILDKT
KVYNGIHPKV EDLISYDNFK KDDLVQIFAD GKLIAIAMAE RNSSFIETLK KQSRNERILT
LEKVFRLD
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