| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1010 |
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| Symbol | |
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| ID | 5452774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1106132 |
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| End bp | 1106593 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640874772 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001410517 |
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| Protein GI | 154249692 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0664563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGACATA TGGCTTTGCT TGCTTTTCTA AGCATTATAG TTTTTCTTTT TTTACTAACA
CAGTATTTTC CATTAAAATA TTATGACATA ATTGTTCAAA ATTGTAAGTC TTTAGATCCT
TTACTTGTTA TAAGTGTGAT AAAAACTGAA AGTAGTTTTA GGGAAAATGC CGAATCAAGT
TTAGGGGCTT ATGGTTTGAT GCAACTAATG CCTGAAACAG CGGAATGGCT AAATAAAAAG
TTTAAAACAA ATTATGATTA TAAAATTCCA GAAGATAATA TCGCTCTTGG CTGTTTGTAT
CTTAATTATC TTATGGAAAA AGACGGTGAT ATTTACAAAG CTCTCGTTCA TTACAACACA
GGACCGTACG CATCAGATGA AATTAAAAAC GACGCTGGTG AAAGATATAT AAAAAAAGTT
ATGAGAAACT ATAAGCTTTA TAAATTCTTA TACAGGAGAT GA
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| Protein sequence | MRHMALLAFL SIIVFLFLLT QYFPLKYYDI IVQNCKSLDP LLVISVIKTE SSFRENAESS
LGAYGLMQLM PETAEWLNKK FKTNYDYKIP EDNIALGCLY LNYLMEKDGD IYKALVHYNT
GPYASDEIKN DAGERYIKKV MRNYKLYKFL YRR
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