Gene Fnod_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1007 
Symbol 
ID5451656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1102616 
End bp1103977 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content36% 
IMG OID640874769 
Productprotease Do 
Protein accessionYP_001410514 
Protein GI154249689 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000215082 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TTAAGATTTT AGTTTTTGGC ATTTTAACAA CATTATTTGT TTTATCTTTT 
GGTATAGTAA ATGCAGATTA CCAAAGTCCT ATTGTGAACG TAGTTAAGGC TGCAGCTCCA
GCAGTTGTCA AGATAGACGT TGTCGTTCAA ACTGAAGTTT ATATTGACCC ATTTATAAGA
GAATTCTACA AGCAGTTTTT TGGTGACATT CCAAGACAAT TTGAAGAATC GGATAGTGTC
GGTTCTGGAT TCATAATAAG TAAGGAAGGT TATATAGTTA CAAATTACCA TGTTGTGGAA
GGCGCGAAGA AGATAACAGT TACCCTTCTT AACGGTGATA CATACGACGC TCAATACATT
GGCGGAGATG AAGAGTTGGA TATTGCAGTC ATAAAAATTT CACCAAAAAA AGATTTACCA
GTTATCGAGC TTGGCGATTC AGATAAGCTT CAAATTGGTG AGTGGGCGAT AGCTATAGGT
AATCCTTTAG GATTCCAGCA CGCTGTAACT GTTGGTGTTA TTTCGGCCGT AGGTAGAAAA
ATACCAAAAC CAGATGGAAG CGGTTATTAC ACAAATTTGA TACAGACAGA CGCGGCAATT
AACCCAGGAA ATAGTGGAGG GCCTTTGCTA AACATATATG GACAGGTAAT AGGTATAAAT
ACAGCAATAA TTAATCCATC TCAAGCTATG AATATTGGAT TTGCGATACC AATAAACACA
GCCAAGAGAT TTATAAATCA AATAATAGCT ACTGGAAAAG TTGAAAAGGC ATACCTTGGT
GTATATGTTC AAACTGTCAC AGAATCCTTG GCAAAGAGTT TGGGTTTAAA AGTAAATAAG
GGAGTTTACG TTGCCCAAGT TGAAAAAGGT TCACCAGCAG AAAAAGCAGG AATAAAAGAA
GGAGACGTAA TAACAAAGCT AAATGGTAGC TATGTGGAAT TAGCTGAAGA ACTAACATCG
CTTGTTAGAA ACTACACCCC AGGTACAAAG GTAAAAGTTA CTCTTAACAG AGCGGGTAAA
GAAATCACAG TTGAGGTGAC ACTTGGAACT TTCCCAACAC AAAAAACAGG GAGCACCGCA
GCTAAAGAAT TTTTAAATTT GAAAGTTTCA AATATAACAT CTGATGATAG AAATAAATAC
AAAGTACCTG CAGGTGTCGA AGGTGTTATT GTTAAGGAAT CTCAAAATTC GTACATAAAA
GTTGGCTCAG TAATATGGAG AATTTCTGTG AACGGTTATT CTTACGACAT AAAAGATATT
AATTCGTGGA ATAAAGTTGT AGAAAACATC AAAAAAGGTG ACTACGTTGG TATATTCTAC
TACTATAATG GTGTTAGGTC CGTCTTTTCA CTGAGATATT AA
 
Protein sequence
MKKVKILVFG ILTTLFVLSF GIVNADYQSP IVNVVKAAAP AVVKIDVVVQ TEVYIDPFIR 
EFYKQFFGDI PRQFEESDSV GSGFIISKEG YIVTNYHVVE GAKKITVTLL NGDTYDAQYI
GGDEELDIAV IKISPKKDLP VIELGDSDKL QIGEWAIAIG NPLGFQHAVT VGVISAVGRK
IPKPDGSGYY TNLIQTDAAI NPGNSGGPLL NIYGQVIGIN TAIINPSQAM NIGFAIPINT
AKRFINQIIA TGKVEKAYLG VYVQTVTESL AKSLGLKVNK GVYVAQVEKG SPAEKAGIKE
GDVITKLNGS YVELAEELTS LVRNYTPGTK VKVTLNRAGK EITVEVTLGT FPTQKTGSTA
AKEFLNLKVS NITSDDRNKY KVPAGVEGVI VKESQNSYIK VGSVIWRISV NGYSYDIKDI
NSWNKVVENI KKGDYVGIFY YYNGVRSVFS LRY