| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1003 |
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| Symbol | |
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| ID | 5453238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1098109 |
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| End bp | 1099725 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640874765 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001410510 |
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| Protein GI | 154249685 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGTAT TTATAAATAC AAGAGAAATT TTCAACGAAG AATTATTTCA GCTTTTTATT
AGTTTGTCTA AGTCTTCCAT TTTTCTAATA TTATGCGATA GCAACGGCAA TATATTAAAT
TATTCCGATA ATGCTCCAGA ATTCATAGTT AAAAATAGGA ATATCTTCGA TGTTGTTGAT
GGACTAAAAG AGTTTATAGA AAATATTAAA TATGAATCCA GCGTATCGCT GGATAATTTT
TTTAGCACAA AAAAATCAAA AGAATTGCCT ATCGTAGAAA AACTTAGATT AATACCAATA
ATCAAAAAAG ATAATTATCT CATACTTGGC GAAGTTGTAA CTCAAAAGGT ACTTATAGAT
GAATATATTT CAGAAAGATT AAACACATTA AACATGTACC TTGAGTTTGC CCCTGTATTT
TTTGTCGTTC TCAACAAAGA GGGAAACATC GATTACATAA ATTCTTGGGC TCTTAGGAAA
ACAGGGTATA ACTTTGAAGA AATTATAGGG AAAAATTGGT TTGAAATATT CATACCTGAA
GATATTAGAA ATAAAGTTTT TGACGTTTTC AAACTTATTT TAGATAAAAA AATTGAACTT
GCTCAAACTT ATGAAAATGA AATATTGACC AAAGATGGAA AATTTATAAC AGTGCTATGG
GAAAACAAAC TATTAGTAAA AAATAACGAG CCTTTTGGAA CGATAAGTGT TGGAGTTGAT
GTTACAGACA AAAAAATAAA AGATTTTGAG GGGAGTGTAT TGTTTGAACT TCTCAATACA
TTTTCAGAGA GCGATTATCA AAGAGCGCTG AAAAGAATTT CAGCAGTTTT AAGAAAAGAT
TGCAATTTTT CATTCATAAA AGTGGAAATT ATAACGTCAG AGGAGATTCA CGAGTCCCTA
ATATTAGATA ATACTGAATA TAATAAGGGC GCGCAAGAAA ATTTGGAAGG ATTAAATATA
TACGAGAAAA AAACAGAAGA TAAAACTATA AGAATATATA CAAAATGTGA AAAGCTACCA
AAATATGCAA CTGAAAATTG TATTAAAAAC GTAGTGAATT TCCTCTTTTC ATTCGCTGAT
AAATTTTATT ATGTACAAAA ACTTGAAGAG GCATCATTTA AAGACCCACT AACAGGATTG
TATAACCGCA GGTATTTTAT GATAATGCTA AAAAATGAAA TAAGAAGGGC AAAAAGATAC
GGAACAAAAT CATCTGTAAT GATGATAGAT TTGGATGGCT TAAAGCAGAT AAACGATACT
TTTGGACATG ACAAAGGCGA TTTGGCAATT AAAACTTTAG CGCAGGCCAT GATTTCAAGC
ACGCGAGTTA CAGATGTGTG TGCTCGTTTT GGTGGAGATG AATTTGCAAT TCTTTTGCCC
CAAACACCTG TAGATAAAGC CCAGGTAATT GTTTACAGAT TAAAAGAAAC ACTGGAAAAG
TTTAATTCTG AAAGCACTGA AAAGTTTAAA ATTCATTTCA GCGCTGGAAT AACTAGCATA
ATTAAAGCAG ACGATGATGA AGGAATAAAT ACGCTCAAAC GTGCAGATGA ATTGTTATAT
AAGGCAAAAA GCCTTGGAAA AAATTTAATT ATTATAGATA ATTTATATAA TGAATGA
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| Protein sequence | MVVFINTREI FNEELFQLFI SLSKSSIFLI LCDSNGNILN YSDNAPEFIV KNRNIFDVVD
GLKEFIENIK YESSVSLDNF FSTKKSKELP IVEKLRLIPI IKKDNYLILG EVVTQKVLID
EYISERLNTL NMYLEFAPVF FVVLNKEGNI DYINSWALRK TGYNFEEIIG KNWFEIFIPE
DIRNKVFDVF KLILDKKIEL AQTYENEILT KDGKFITVLW ENKLLVKNNE PFGTISVGVD
VTDKKIKDFE GSVLFELLNT FSESDYQRAL KRISAVLRKD CNFSFIKVEI ITSEEIHESL
ILDNTEYNKG AQENLEGLNI YEKKTEDKTI RIYTKCEKLP KYATENCIKN VVNFLFSFAD
KFYYVQKLEE ASFKDPLTGL YNRRYFMIML KNEIRRAKRY GTKSSVMMID LDGLKQINDT
FGHDKGDLAI KTLAQAMISS TRVTDVCARF GGDEFAILLP QTPVDKAQVI VYRLKETLEK
FNSESTEKFK IHFSAGITSI IKADDDEGIN TLKRADELLY KAKSLGKNLI IIDNLYNE
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