Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0999 |
Symbol | |
ID | 5452738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1093301 |
End bp | 1094659 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640874761 |
Product | response regulator receiver protein |
Protein accession | YP_001410506 |
Protein GI | 154249681 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.766542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGTTGACA AAATATGTGT CTTATCTAAC AAAGAAGAAA TTGTTAGCGA AGTCCAGGAA TTGCTAAATT TTGTTGGATA TGAAGTTTTT TTAATCAATA GTGTAGAAGA CTTAAATATG GAAAATAATT TCCAAATTAT TTTAATTTAT TCATCCAATA CACACGAAAG CTTTACTTGG ATAAAAAAGA TAAAAACAGA CAGTAAACTT AAAGATATTC CCATAATTCT TATAGTCGAA AAGAAGGAAT ACACCATACT TTTTGATGCA TATCAAATTG GGATTTCGGA CTTTATAGAA CTTCCCGTTA TGGATATTGA GCTTATTTCA AAGGTTGCGC TCCATATAGA ACTTAAGAAA AATAGAGAGA GAATAGAGAA CCTTTACACT GAATTGAAAG ATAGTTTAAG CCTGGCGACT AATTTACAAA AGCTTATGCT ACCACCAGAA ATATCTTTTA AGAATGGTGT ATGGTTCACT TCAAGGTACT TACCTGCACA GATTGTAGGT GGAGACATTT ACGATTACTT TGAAATTGAT GGAAAGGTTT TTGGATATGT AGCTGACATA TCCGGACACG GAATCCAATC TGCTCTTTTA TGTTCTGCGG TAAAATCCGC TATACGTTCT TCCACAAGCA GAAATACGTC ACTTGTTGAT ATTGTTAACG AACTTCACGA AGGAACAAAA AGTATATTGG CAAATAACTA TTTGACGGGA ATATTTTTCA AGATACATCC TGGTGGTAGC GTCGAATATA TTAACTGTGG CCATCCGGGT ATTATCGTAT ATGACGGAAA AGATTTTTAC CCGCTGGATA TGAAAAATAC TTTCCCGATA GGCTTGATTG ACCATATTTA TTCAATAGAA GATGTTGGAA AATTCTATAT GGAAGAAGGT AACGCTTATC TTCTTTATTC CGATGGCCTG TATTCAATCT TTGAGAAAAA GTACCCTAAT GAAAGTTCAC ACAAACTTTT ATTTGAGTTT CTAAAAAGAG AAGTTGCCGG TGTTCCAAGC GAAATTCTGC CATTTTATAT AGAAAACATT ATAAAGAAAT TGTACGCAGA GATACCAGAT GATTACTCAG TAATATCCAT TGGTAAAAAC GAGCACTTTT GTTTTGTGGA TAACGAACAA AAAATTATAA ATACGAGCAA TAGAATTATA GAAGATATAG TAAAAGAACT TGAGTTGAAT TCTTTCTCAG ATGATTACGC AATTTTATGT AATGAGTACA GGGCGTATAG TGTATTCATG ACCAAAGGTA TAGAAATAGG ACACATTTTG AGAAATTTAC CGATGAGTAT CTCACTATCT TTTGGAGATG TAGCAATGAT AAAAGTATTT TATCAATAA
|
Protein sequence | MVDKICVLSN KEEIVSEVQE LLNFVGYEVF LINSVEDLNM ENNFQIILIY SSNTHESFTW IKKIKTDSKL KDIPIILIVE KKEYTILFDA YQIGISDFIE LPVMDIELIS KVALHIELKK NRERIENLYT ELKDSLSLAT NLQKLMLPPE ISFKNGVWFT SRYLPAQIVG GDIYDYFEID GKVFGYVADI SGHGIQSALL CSAVKSAIRS STSRNTSLVD IVNELHEGTK SILANNYLTG IFFKIHPGGS VEYINCGHPG IIVYDGKDFY PLDMKNTFPI GLIDHIYSIE DVGKFYMEEG NAYLLYSDGL YSIFEKKYPN ESSHKLLFEF LKREVAGVPS EILPFYIENI IKKLYAEIPD DYSVISIGKN EHFCFVDNEQ KIINTSNRII EDIVKELELN SFSDDYAILC NEYRAYSVFM TKGIEIGHIL RNLPMSISLS FGDVAMIKVF YQ
|
| |