| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0989 |
|---|
| Symbol | |
|---|
| ID | 5452467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1084241 |
|---|
| End bp | 1084990 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640874751 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001410496 |
|---|
| Protein GI | 154249671 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCGTA AAGTAACAGA AAACGTATAT GTAATAGAAC ACGAAGAGGC AGCGAATAAT
GTTATTATTA TTGGGAAAAA GGGTGTAATA CTTGTAGACA CTTCCTTATT TCCCGAGAAG
GCAAAGAGTA TTAGCAAATT TGTCAAAGAA TTTACTATGA AACCGATTTC CTTGGTTTTA
AACACACATT ACCATCCAGA CCATACTTTC GGTAATGTTA TTTTTGATTG TCCAATTGTT
GCTCACTCGC TAACACGAGA GAAAATGGAG CAATTTGACC AAAATTACTT TGTGGAAATT
GGAATTGATT ATTTTAAACC AAAACTTCCA GACGTTATTT TTGATGATAT ATTTGAGTAC
GAAGATGGAT TAAAAATCAA ATTTGTCCAT GCACCAGGTC ATACTCCAGA TTCTTCTTAT
GTTTATATCC CTGAAGAAAA TATTCTGATA ACAGGTGACA CTGTTATAAA TACTATACAT
CCTGAAATTG TTGAAGATAG TAATTTAAAC GTATGGATTA AGACACTTGA AAAACTTCCT
AAAGCCAAAC ATGTAATACC AGGCCATGGA GAATATGGTG ATTATAAATT AGTTACAGAT
ATGATTGATT ATATTGAAAA AATCAAAAAG ATAATAATTG GTGAATTGAG ACCAGCAGAT
TTTGAAGCTG ATGAAAATTT CTCTAAGAGA CTCCATCCCG AAATGTTAGA GTGGAGTTTG
AAAAATCTTT TATCAAAAAC TAATTTTTAG
|
|---|
| Protein sequence | MVRKVTENVY VIEHEEAANN VIIIGKKGVI LVDTSLFPEK AKSISKFVKE FTMKPISLVL
NTHYHPDHTF GNVIFDCPIV AHSLTREKME QFDQNYFVEI GIDYFKPKLP DVIFDDIFEY
EDGLKIKFVH APGHTPDSSY VYIPEENILI TGDTVINTIH PEIVEDSNLN VWIKTLEKLP
KAKHVIPGHG EYGDYKLVTD MIDYIEKIKK IIIGELRPAD FEADENFSKR LHPEMLEWSL
KNLLSKTNF
|
|---|
| |