| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0987 |
|---|
| Symbol | |
|---|
| ID | 5452667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1082391 |
|---|
| End bp | 1083773 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640874749 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001410494 |
|---|
| Protein GI | 154249669 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1480] Predicted membrane-associated HD superfamily hydrolase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGAA AAATTCCTGA AGGGAATATG CTTAAAGATG AAGCATTTAT CTATGATGGT
ATAATACTTG CTCTTATCAT AAGCGTTGCC AACAACATAT ATGACCTTAG CTTGCTTGAT
CTTGCAAACG AATTTATACT TATACTTGTC ATTTGGTATG GTATTATAGA ACATTTCATT
AGGAATTCCA ATATAATTAA CATCGACCTT AGGTATAGAC TGCTTTTTTA TAGTATTTTC
CTCTTTGGCG GAATAACAAA TACATTAATA TATAAATCAT ACGGTATTAC TTTCATCCCG
ATAACAGCAG TCCCAATGCT TATAACCCTC TTGATTGACT ACGAATTTGG CGCAAGTGCT
GGCTTGATTT TATCACTTTC AACCGCATTC CATCACAAAG ATTTCTTTAT GTTCCTTCAC
TTTTTCCCTC AGGTATTCAT AGTTACCTAT ACGCTAAGAA ACGTTAAAAA TAGGATACAA
GTTACCAAAG CGGGGCTATT TTCAGGAATA GCTAGTCTAT TAATGATTTT TCTCCAAGAA
CCTGTTAGAC ATTTCTACTT TTCCTTAAAA GATTATGTGA TTGTATTTAT TAATCCTTTT
GTATCATCGA TAATTGTCCT CGGAATACTC CCATATATAG AGGTATCATC AAGGATATAT
TCAAATATAG GTCTTTCAGA AATTTCAACT ATAAACCATC CGTTGTTGAA GTTGCTTTCA
GTTCATGCGC CTGGGACTTA TTATCACAGC ATGAGGGTGG CAGAACTTGC GGAACGCGCT
GCAGAAAGTA TAAATGTAAA TGCCATACTT ACAAGAGCCT GTGCGTACTA TCACGATATA
GGGAAAGTTA GAAATCCTGA GTTCTTCATA GAAAATTTAA AGAGCATTGA TGATAATCCC
CATAATTCAC TTCAACCGGA AGTAAGCGCA AAAATCATAA TGAAACATGT GACCGATGGA
ATAGAAATCG CCAAAAAATA TAGATTGCCC ATACAAATAG AAATGGCAAT TCCTCAGCAC
CATGGCACAA GGTTACAAAA ATACTTCTAC CTCAAAGATG TTCAGGAGAA CGGAAAAAGC
GACATTGAGA AATATCAATA CCCTGGCCCA AAACCAAAGA CAAAGGAACT AGGAATAATA
ATGCTCGCGG ATGTTGTGGA AGCAAAATTG AAAAGTATCA AAGATAAAAA TATAAATGAC
GTAAGTAAAA TAATAGAGGA AACGGTTATT GAGCTTTTTG AAGAGGGTCA ATTAGATGAC
ACAGGTCTAA CTATTAGCGA GCTTAGAACG ATAATAGAGA GTTTTACTAT CGTCTTCGAA
AGTTTGTCTA AGCAAAGAAT AGAGTACCCT ACATTAAACC AAGAAATGGA AACTTCTGGA
TAG
|
|---|
| Protein sequence | MNRKIPEGNM LKDEAFIYDG IILALIISVA NNIYDLSLLD LANEFILILV IWYGIIEHFI
RNSNIINIDL RYRLLFYSIF LFGGITNTLI YKSYGITFIP ITAVPMLITL LIDYEFGASA
GLILSLSTAF HHKDFFMFLH FFPQVFIVTY TLRNVKNRIQ VTKAGLFSGI ASLLMIFLQE
PVRHFYFSLK DYVIVFINPF VSSIIVLGIL PYIEVSSRIY SNIGLSEIST INHPLLKLLS
VHAPGTYYHS MRVAELAERA AESINVNAIL TRACAYYHDI GKVRNPEFFI ENLKSIDDNP
HNSLQPEVSA KIIMKHVTDG IEIAKKYRLP IQIEMAIPQH HGTRLQKYFY LKDVQENGKS
DIEKYQYPGP KPKTKELGII MLADVVEAKL KSIKDKNIND VSKIIEETVI ELFEEGQLDD
TGLTISELRT IIESFTIVFE SLSKQRIEYP TLNQEMETSG
|
|---|
| |