Gene Fnod_0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0985 
Symbol 
ID5452261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp1080668 
End bp1081306 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content35% 
IMG OID640874747 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001410492 
Protein GI154249667 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAATTA TATCTGCGTC TATTTTAGCA GCTGACCTTT CAAGACTAAA GGAAGAACTC 
GAAAGAGTAA AACCATTTAT CGATGAGATA CACCTTGATG TTATGGATGG GCATTTCGTT 
CCAAATTTGA CGTTTGGTTA TCCCATGATA GAAACATTGA GAACATTTAC AGACCTTCCC 
ATAGATGCTC ATCTTATGGT AACAAATCCA GATGACCATA TCAAATTATT CATAGAAAAA 
GGTGCGACGC GTGTTACAAT TCATCAAGAA ACTTGTTATC ATTTACATAG AAGTGTTGAA 
TTAATAAAAT CACTTGGCGC AGAGGCATTT GTTGCTATAA ACCCTGCAAC TTCTATCTAT 
ACCCTTGAAG AAATTTTATC TTACGCGGAT GGAATTTTAG TAATGACGGT TAACCCGGGA 
TTTTCAGGTC AGAAATTCAT ACCAACGATG ATGGAGAAAA TCAAGCGCTT GAATGAAATA 
AGAAAAGAAA GAAATTTATC TTTCAAGATA GCTGTAGATG GTGGTGTTGG TAACTCAAAC 
GCTCAAGACT TAATCAACAT CGGAGTTAAT ATACTTGTAA TGGGGTACGG TGTTTTCAGA 
AACGATAAAT TACATGAATT AAATAAGTTC AGAATGTAA
 
Protein sequence
MAIISASILA ADLSRLKEEL ERVKPFIDEI HLDVMDGHFV PNLTFGYPMI ETLRTFTDLP 
IDAHLMVTNP DDHIKLFIEK GATRVTIHQE TCYHLHRSVE LIKSLGAEAF VAINPATSIY 
TLEEILSYAD GILVMTVNPG FSGQKFIPTM MEKIKRLNEI RKERNLSFKI AVDGGVGNSN 
AQDLINIGVN ILVMGYGVFR NDKLHELNKF RM