| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0980 |
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| Symbol | |
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| ID | 5451674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1074710 |
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| End bp | 1075384 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874742 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001410487 |
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| Protein GI | 154249662 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTACGAAA GGAAAAACCC AGCGTATTTG TATTTGATAT TAGTGAATTC TCTTATTCTT
CTTATTTTTT ATGTATTCAA AACATTTTTT ATAAAAAGTG ACTTAGCATA CTTACTTTTT
GGTGCGCAAT ACGGTCCACT TATCAAATCT GGTCAGTGGT ACAGGATAAT TACCGCTATG
TTTATGCATG GTGGTTTTTT ACACCTTGCC TTTAATATGT ATGCTTTGTA CATCATTGGT
AACTATGCTG AAGGTATATA CGGAACTTAC CGATTTATTA CTTATTATTT TATTACTGGA
ATTGTGGGAA ATGTAGCAAC CCATATTTTC TATTATGGCT CTCTATCCGT TGGTGCAAGT
GGAGCTATTT TTGGTCTTGT TGGCGTGCTT TTTGGTGCTG GATTTAGAAA AGATACACCA
TTCTTTTTAA AACCTATAAC GGGGAGCGCT TTACTTCCAA TGATAGTGAT AAATGTTGTT
CTTGGCTTTA TTCCAGGCTC AGGTATAAAC AACGCTGCCC ACATAGGTGG ATTACTAACA
GGTATCTTAC TTGGTTACAC ATTACCAGTT TACGATAATT ATCGTTCGCA AAAGATTTGG
AAATTATTGG CGTATGTGTT AATAGGTTTA ACGGTTATTT CTTACGTTTG GCTCATAAAG
GATGCTTTGG CGTAA
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| Protein sequence | MYERKNPAYL YLILVNSLIL LIFYVFKTFF IKSDLAYLLF GAQYGPLIKS GQWYRIITAM
FMHGGFLHLA FNMYALYIIG NYAEGIYGTY RFITYYFITG IVGNVATHIF YYGSLSVGAS
GAIFGLVGVL FGAGFRKDTP FFLKPITGSA LLPMIVINVV LGFIPGSGIN NAAHIGGLLT
GILLGYTLPV YDNYRSQKIW KLLAYVLIGL TVISYVWLIK DALA
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