| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0961 |
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| Symbol | |
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| ID | 5453196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1051994 |
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| End bp | 1052761 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640874723 |
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| Product | type III secretion system inner membrane R protein |
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| Protein accession | YP_001410468 |
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| Protein GI | 154249643 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACATTT ACGCACTGCT TCAAAGATAC GCGCTTAGCT GGGGGCTTAT TTTAACAAGG
CTCACAGGAA TGATGGTTAT AGCACTTATG TTTGCTGGAT TTTCACTACC ATTAGAAATA
ATGGTAGTTT TGCTTTTGGC TCTCAGTTAC GTAACATTAC CTATGGTAAA TATAATGGTT
CCGATAACTT TACCGATATC CACATTAGTC ATATCCCTGC TTTTTAATTT CTTTATAGGC
TTTGTCATAG GTTTAATGGC TTACACAATC GTAGGTGCGG TCTATATTGG TAGTGAAATT
TTCGGTATAC AATCTGGTTT TAACGTAAGT GGCTCACTCG ATCCAACGAT GGAAGAATCC
CCCATTACAA GTGAGTTTGT CTACCTTATA TCCGTTTACG TATTTGTTTC CTTAAAAGGA
CATCTAATTA TCTACTCAAG TGTGGTAAAA TCGATAGAGA AATTCCCGCT TGTCATAACG
GACATACCAT TTAAAGAAAT AAACAGCCAG TACTTTGAAT TATTTATGGA TGCGTTTATT
TTTTCGCTCC AAATTGCACT TCCACTCATC GGCTTAATGT TTTTAATCAA CGTGCTCTTT
GGAATACTAT CACGCCTTGT TCCTCAGATG AACGTCTTTA TGGTTGCAAT GCCAGCGAGT
ACCATGATAA TGTTTTTACT GTTAGTTACC ATGATACCTG TGTGGATTGA GATGATTACT
AGAATGATTT ACAAACTTGA GCCGTATATT AGTAGATTAT TGAAATAG
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| Protein sequence | MDIYALLQRY ALSWGLILTR LTGMMVIALM FAGFSLPLEI MVVLLLALSY VTLPMVNIMV
PITLPISTLV ISLLFNFFIG FVIGLMAYTI VGAVYIGSEI FGIQSGFNVS GSLDPTMEES
PITSEFVYLI SVYVFVSLKG HLIIYSSVVK SIEKFPLVIT DIPFKEINSQ YFELFMDAFI
FSLQIALPLI GLMFLINVLF GILSRLVPQM NVFMVAMPAS TMIMFLLLVT MIPVWIEMIT
RMIYKLEPYI SRLLK
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