| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0956 |
|---|
| Symbol | |
|---|
| ID | 5451745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1043878 |
|---|
| End bp | 1047090 |
|---|
| Gene Length | 3213 bp |
|---|
| Protein Length | 1070 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640874716 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001410463 |
|---|
| Protein GI | 154249638 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT ACTATTTCGA TGAAAAACAA AGATTCGTTA TTGAAAATTA CAATTCATCT
AAACCATTCG CAAGTTTCCT ACCGGGAATA GCCGGTAAAA AAGGCATTCC GCTGTGGGTC
TTTTACGTCA ACAGAGGTCA GGGGATTGCT TCTTTTGGTA TTGCCCACAA AGACAACCCA
ATAATGGAAT TTCACCCTGC TTTTAGAAGC TATCAAACTG TATTTACGCA TGGTTTTAGA
ACGTTTATAA AAGAAAAAGG CATGATATAC GAACCATTCC AATATCCAAA AAATAAGGCT
GTTTCCCAAA AGATGCACAT CGGTATAAAC GAGCTTGAAT TGGTTGAAAC AAACCAAGAA
AAAGGTATAG AGACTTCCGT ACTTTACTTT ACACTTTCAC AAGAGAAAAT CGCCGCTTTG
GTAAGGATAG TTACACTTAA AAATATCTCA GATAGTGATA AACAACTCGA GGTCTTAGAC
GGCTTACCAA CGGTTATACC TTACGGGATT AACGATTATG GACTTAAGCA CGTTGGTAAC
ACATTAAAAG CGTGGATGGA AGTTTACAAC CTCGAGAGTG GGATTCCCAT TTTCAAAATG
CGTTCTTCTA CGGAAGATAC AGTTGAAGTA AAAGAATTCT CTGAAGGGAA TTTTTACACA
TCGGTTATTC AGAATAACAA TGAAACAACA CATGCGAAGA TGATAATAGA TACAGACCTT
GTATTTGGTT ACAACACGTC TTTTGATTAT CCAAGTGTGT TCGCTGATGT TTCATTGAGT
GAATTAATAA ATAGAAAGCA AATAAAAACA AATAAAGTAC CGTGCGCATT CGCGCCTGTT
TCTGTAACAC TAAAACCTGG TGAGAGTATA AAGATTTATT CCGTAACAGG TCATGCACCA
GATACTTCAG TACTTGATGA GTATAAATCT AAATTTACCA ATCCAAAGTA TTTTGAAGAA
AAATACATCG AAGGAAATGA GATAATCAAA GAAATTACGC GCGATATCGA TACAGAGACG
TCTTCAAAAC TTTTCAATGA ATATTCCAAG CAGAGTTACC TTGATAACCT TCTTAGAGGT
GGTTACCCTA TAGTTTTCAA AAATGGTGAA AAACCACGAG TTTATCATAT ATACTCAAGG
AAACACGGGG ATTTAGAAAG AGACTATAAC TATTTTGTGC TTCTTCCTGA ATATTATTCA
AGCGGAAATG GAAACTACAG AGATGTCAAT CAAAACAGAA GAAACGACGT TTATTTCAAT
CCTTTCATTG AAAGGTACAA TGTAAAATTC TTCATGAACC TTATACAAAC CGATGGATAC
AATCCACTTG TAATCAACGG AGTCAGGTAC AAAATATCAC CTGAAAATCT TGGAATAATC
GATGAACTTG TCGAAGAAAA TTACACCAGC AGAGTTAAAG AATTCCTATC GAAAAACACG
TTCACACCTG GAAAGGTTTC TATGTTCTTA GAAAGAGAGA ATATATCACT CAAAGTTGAC
GAGGAGGAAT TCCTAAGACG TATTATCGAG ATATCAGATG AAGAAACAGA CGCTGTACAT
GGTGAAGGTT TCTGGACAGA CCATTGGACG TACAACCTTG CCCTTATAGA AAGCTATTTA
GAGATTTATC CCGATAGGGA GGAAAATCTT CTTTTCGATG ATAAAGATTA CACGTATTAC
GATAATTACA TGGTAGTCTT ACCACGAGAA AGAAGGTACG TTTACGTCGA TGGAAAGGTA
AGACAGTACA ATTCTCTTGT CGAAGATAAA GAAAAAAGAA AGCTAATCGA GTCAAGAAAC
GAATACAAGA ACGTTATGAG AATATCTAAA GGCACAGGTG AAATTTATCG AACAACGTTG
ATTTCCAAAC TTATCAATCT TGCAGCTATA AAGTTTTCAA CCACAGACCC GTGCGGTGTT
GGAATTGAAA TGGAGGCTGG AAAACCTGGT TGGTATGATG CGCTCAACGG CTTACCGGGA
CTATTTGGCT CTTCTGTCAA CGAAACTTTC GAACTCGTTA GACTTTTGAA TTTCGTTATA
GAAAAACTTA ACAATTACAA AGGAAAGGCT GTGCTATTGC CAATTGAGGT AAGTAAATTG
ATTGATGAAG AAGTAAAATT AGTGGAAGAA TTTGAAAAAT CAAACGAGGA CCTAGAAATT
AAAAATTACA AGTACTGGAA CGATATATCT GATTTAAGGG AAAAATACCG TGAAGAAACA
AAATATGGAT TTACTGGTGA AGAAGTCGAA TGCAAGAGCG AAGAACTCGC TCAAAGACTT
GAGAAGCTGA GAAATAAATT ATTAAAAGCT TTGGACAAAG CGATAGAAGA AAATAACGGT
ATTATGCCCG CTTACTATTA CTATGAGGCT GAAAAATACG AAATAATTTG CGAAGAAAAT
GGGCAAAAGT ACGTTAAAGT ACTCAAATTC AAGCAAAAGA AAATGCCTCT ATTTTTGGAA
GGTATCGTTA GGGGATTCAA AGTTTACAAG ATATACAAAG GTAAAGAATT TCTTAGAAAT
GTCTATCATA AAGTCAAAGA AAGCCCGTTA TTTGATGAAA AGCTTAAGAT GTACAAAGTT
AACGCGTCGC TTAGCGATCA GCCAATTGAA ATAGGTAGGG CGAAAGCGTT TACACCAGGT
TGGCTTGAAA ACGAATCCAT ATGGTTACAT ATGGAGTACA AATACATGCT AGAAGTGATA
AAAGCCGGCT TATACGATGA ATTTTACAGT GACTTCAAGA ATGTTTTCAT ACCATTCTTA
GACCCAGCTG TGTATGGTAG AAGCACGCTC GAAAATTCTT CATTTATAGC GAGTAGCGCA
AATCCAGACG AATCCGTGCA TGGTAACGGT TTCGTCGCAA GGTTATCCGG AGCAACCGCA
GAATTTTTAA GCATTTGGAA GCTTATGTTC ATCGGTGAAA AGCCATTTAG ATATGAAAAT
GGAAAATTGA TACTTACCTT CAACCCAGCG TTACCTTCTT GGCTCTTTGA TGAAAACGGC
ACGGTATCAT TCAACTTCCT TGGCAAATGC AAAGTGATTT ACCATAACTA TTCAAAACAA
GACACTTACA AACTCAATCC AGAAAAACAA AAGATAGTAC TACATACAAA AGATGGAGAA
AAAATAACTT TAAACAACAA TAAAATCGAA AACCCATATG CAGAAATGGT AAGAAATTTG
AAAATAGAAA AGATAGAAGT TTACTTGGAT TAA
|
|---|
| Protein sequence | MKNYYFDEKQ RFVIENYNSS KPFASFLPGI AGKKGIPLWV FYVNRGQGIA SFGIAHKDNP
IMEFHPAFRS YQTVFTHGFR TFIKEKGMIY EPFQYPKNKA VSQKMHIGIN ELELVETNQE
KGIETSVLYF TLSQEKIAAL VRIVTLKNIS DSDKQLEVLD GLPTVIPYGI NDYGLKHVGN
TLKAWMEVYN LESGIPIFKM RSSTEDTVEV KEFSEGNFYT SVIQNNNETT HAKMIIDTDL
VFGYNTSFDY PSVFADVSLS ELINRKQIKT NKVPCAFAPV SVTLKPGESI KIYSVTGHAP
DTSVLDEYKS KFTNPKYFEE KYIEGNEIIK EITRDIDTET SSKLFNEYSK QSYLDNLLRG
GYPIVFKNGE KPRVYHIYSR KHGDLERDYN YFVLLPEYYS SGNGNYRDVN QNRRNDVYFN
PFIERYNVKF FMNLIQTDGY NPLVINGVRY KISPENLGII DELVEENYTS RVKEFLSKNT
FTPGKVSMFL ERENISLKVD EEEFLRRIIE ISDEETDAVH GEGFWTDHWT YNLALIESYL
EIYPDREENL LFDDKDYTYY DNYMVVLPRE RRYVYVDGKV RQYNSLVEDK EKRKLIESRN
EYKNVMRISK GTGEIYRTTL ISKLINLAAI KFSTTDPCGV GIEMEAGKPG WYDALNGLPG
LFGSSVNETF ELVRLLNFVI EKLNNYKGKA VLLPIEVSKL IDEEVKLVEE FEKSNEDLEI
KNYKYWNDIS DLREKYREET KYGFTGEEVE CKSEELAQRL EKLRNKLLKA LDKAIEENNG
IMPAYYYYEA EKYEIICEEN GQKYVKVLKF KQKKMPLFLE GIVRGFKVYK IYKGKEFLRN
VYHKVKESPL FDEKLKMYKV NASLSDQPIE IGRAKAFTPG WLENESIWLH MEYKYMLEVI
KAGLYDEFYS DFKNVFIPFL DPAVYGRSTL ENSSFIASSA NPDESVHGNG FVARLSGATA
EFLSIWKLMF IGEKPFRYEN GKLILTFNPA LPSWLFDENG TVSFNFLGKC KVIYHNYSKQ
DTYKLNPEKQ KIVLHTKDGE KITLNNNKIE NPYAEMVRNL KIEKIEVYLD
|
|---|
| |