| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0947 |
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| Symbol | |
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| ID | 5451639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1036478 |
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| End bp | 1037356 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640874707 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_001410454 |
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| Protein GI | 154249629 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00857924 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAAAA AAGATAAAGA ACTTATAATC GGTGCTCATA TGCCTATAGG TGGTGGATTT
GCTCGAGTTC CAAGAGAAAC AATAGAAATC GGTGGTAATG CATTCCAGAT ATTCCCACAC
AATCCACGGC AGTGGAATGC CAAGTTACCA AATGAGGATG ATGTAGTACA CTTTCTCAGG
GACGTAAAAA AGTACAATTT AAATCCAGAA TACTTTCTGT GCCATTCGGG ATATCTTGTT
AACGTAGCAA GCCCAAGAGA TGATGTCTGG GAAAAATCGG TTGAGTTACT CGCAATAGAG
ATGAAGATTT GCGCAAAACT TGGGATAAAA TATTTGAACA TTCACCCTGG AAGTCACCTT
GGTGAAGGTG AAGAAGTCGG AATTGAGAGG ATTGTTAAGG CACTGAATTT GGTTATGGAA
AAGGAAAAGA GTGTACATAT AATGCTTGAG AATGTGGTAA TGAAGGGTGG GAATATAGGT
TACAATTTTT CTCAGATGAG GAGGATTATA GAGCAGTGTA AGTATCCTGA AAGGATAGGT
CTAACTTTCG ATACATGCCA CGGGTACGAC GCGGGGTACG ATGTAACTAA ACCGGAAGGT
ATTAAAAAGT TGTTGGAAGA GATAGATAGA GAAGTGGGAA TTGGTAGGAT TAAATTTGTC
CACCTTAACG ATACGAAAAA TACTTTAGGT TCAAATAAAG ATAGGCACGA AAATATTGGA
AATGGTAATT TGGGTGTTGA AGGGTTGAAG GTATTTCTGA GTAATCCAGT ATTTTCATCT
TTGCCATTGC TTCTTGAGAC CCCTGGAGAT AACCCGGAAC ATGCCGAAGA TATTGCGAAG
ATTAAAGAAA TATATGATTC GATAGAAGCG CCAAATTAA
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| Protein sequence | MSKKDKELII GAHMPIGGGF ARVPRETIEI GGNAFQIFPH NPRQWNAKLP NEDDVVHFLR
DVKKYNLNPE YFLCHSGYLV NVASPRDDVW EKSVELLAIE MKICAKLGIK YLNIHPGSHL
GEGEEVGIER IVKALNLVME KEKSVHIMLE NVVMKGGNIG YNFSQMRRII EQCKYPERIG
LTFDTCHGYD AGYDVTKPEG IKKLLEEIDR EVGIGRIKFV HLNDTKNTLG SNKDRHENIG
NGNLGVEGLK VFLSNPVFSS LPLLLETPGD NPEHAEDIAK IKEIYDSIEA PN
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