Gene Fnod_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0941 
Symbol 
ID5451998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1031476 
End bp1031967 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content33% 
IMG OID640874701 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_001410448 
Protein GI154249623 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.654919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATGTAG GCGGAACACT AATTTGGTAT TACATGATTT GTAAAAGAGA GGTTTGGTTA 
ATGACACATG AAATAGTACC AGACCAACAT AATGAGAACA TAGAGCTCGG ACGATTTATT
CACGAGTTTT ATTATAGACG GGATAAAAAA GAGATTAGAT TTGGTAATGT TGTTTTTGAT
GTGCTCTATG AGAAAGGTAA TCGACTCATA ATAGGAGAAA CGAAGAAATC TTCTAAGTTT
TCTGAAGCAT CTAAATGGCA GTTGATTTAT TATCTAAAAG TTTTAAAAGA TGCAGGTATA
AGTGCTGAAG GTGTATTGAG TTTTCCGGAA GAGAGGAAAA AAATAGAAGT AAAACTATCC
GATGAAGCTG AATTAGAGCT TGGAAAAATT TTGAAGGATA TAGAAGATAT TGTTAATCAG
CCTAATCCAC CAAAAGTGGT GAAGAATAAT TTTTGTAAGA ATTGTGGTTA CAAAGAGTAT
TGTTTTTCCT AA
 
Protein sequence
MDVGGTLIWY YMICKREVWL MTHEIVPDQH NENIELGRFI HEFYYRRDKK EIRFGNVVFD 
VLYEKGNRLI IGETKKSSKF SEASKWQLIY YLKVLKDAGI SAEGVLSFPE ERKKIEVKLS
DEAELELGKI LKDIEDIVNQ PNPPKVVKNN FCKNCGYKEY CFS