| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0939 |
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| Symbol | |
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| ID | 5452468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1016175 |
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| End bp | 1016885 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640874699 |
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| Product | CRISPR-associated Cas5 family Hmari subtype protein |
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| Protein accession | YP_001410446 |
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| Protein GI | 154249621 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02592] CRISPR-associated protein Cas5, Hmari subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTCT TAGTATTTGA TATAAAGGGA AAATTTGCAC ACTTTAGGAA ATTTTACACA
AATTCTTCTT CGCTCTCTTA TTCAATTCCA CCGAGAACAA CGTTGGAGGG AATTATTGCA
GCAATTTTAG GTTTTGAAAG GGATAGTTAC TATGAAATAT TAAATGCACA AAAGTTAAAT
ATAGGACTTA AAAAAGCAAC TCCAACAAGA AAAATTATTC AAACATTGAA CTATATAAAA
GCTAAAACTC CAAGTAATGT GTATGACCCA GACGAACATA CACAAATTCC ATTTGAAATT
ATTACTTCGA ATGATAAAGT AATATATAGG GTTTATGTTA ACCATGTTGA TCAAACAATA
ATGGAAGATT TAGAATACAG ATTGAAAAAT AACAAATTTT GCTATATCCC TTATTTTGGT
GTCGCTCCCT TTAATATCTC AATAGATCTC AAAGGAAAAT TTCAAGCAGA ACCAAAATTT
AGCGAAGATT TTGTGAAAGT ATCATCTGTA ATTAGAAGAA ACTTGATATC TTCTTTAAAA
GTGGAAGAAG AAGTAATTTT ACTAAAGGAA AAAATGCCAA GAGATTTTTC TAGAGAAAGG
ACAGTCATAG AAATGGAAGA CTACATTTTT GAAGAAAGTG GAAAAGCAAT AGAAGTTAAG
CTTAACTCAC ATTATTACGT TATAAATGAG GAAAATATTG TTTTAATGTA A
|
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| Protein sequence | MEFLVFDIKG KFAHFRKFYT NSSSLSYSIP PRTTLEGIIA AILGFERDSY YEILNAQKLN
IGLKKATPTR KIIQTLNYIK AKTPSNVYDP DEHTQIPFEI ITSNDKVIYR VYVNHVDQTI
MEDLEYRLKN NKFCYIPYFG VAPFNISIDL KGKFQAEPKF SEDFVKVSSV IRRNLISSLK
VEEEVILLKE KMPRDFSRER TVIEMEDYIF EESGKAIEVK LNSHYYVINE ENIVLM
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