| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0936 |
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| Symbol | |
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| ID | 5453014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1012612 |
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| End bp | 1013334 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640874696 |
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| Product | CRISPR-associated Cas family protein |
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| Protein accession | YP_001410443 |
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| Protein GI | 154249618 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGGGGGA TTCTAACATT AAAACTTGAT AAACCACTTA CCCTTCCCAT CCATTACAAC
CACATACTCC AAGCCGCAAT TCTAAACCTT CTCAGTGATG AGAACTACTC TAAATTTATC
CACGATACTG GTTTTCAATT TGGTAAAAGG CGATTTAAAA TGTTTACCTT CTCGAGGCTC
GAGGGAAAAT TTTCAATTGA TATAGAAAGA AAAACGATAA CATACTTTGA AAGAGCGTAT
TTACACATTT CAACAATAGA AGATAAATTC ATAGAATACG TCGTAAACAA TCTACTTCTC
GAAGGTTTGG ATATCAAAGG TGAAAGAATT CACGTAGACA AAATAGAGTT AAAGTCAAAT
ACGACTAACT TTGGAAAAAT CATAACAAAA TCACCGATAG TTGCTTATAG CACATTTGAA
TTAAATGGTC GCAAAAAGAC ATATTATTAC AATCCAAAAG AAAAAGAGTT CCAAGAAATT
TTGGCAAACA ATTTAATAAA GAAATATATA GCTTATTTTG AAAAAGAACC TAAAAATAGA
TATTTTGAAA TAACACCTGT CTCAAATCTC AAGGAAAGTA TAGTTATATA TAAAGGCACG
GTTATAAGAG GTTGGAATGG TATCTTTCAA ATTAATGGTT CTGATGAATT AATAAATATT
GCATATTACA CGGGATTAGG TGCGAAAAAC TCGCAAGGTT TTGGTTGCTT TGAATTCATA
TAA
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| Protein sequence | MRGILTLKLD KPLTLPIHYN HILQAAILNL LSDENYSKFI HDTGFQFGKR RFKMFTFSRL
EGKFSIDIER KTITYFERAY LHISTIEDKF IEYVVNNLLL EGLDIKGERI HVDKIELKSN
TTNFGKIITK SPIVAYSTFE LNGRKKTYYY NPKEKEFQEI LANNLIKKYI AYFEKEPKNR
YFEITPVSNL KESIVIYKGT VIRGWNGIFQ INGSDELINI AYYTGLGAKN SQGFGCFEFI
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