Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0906 |
Symbol | |
ID | 5452850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 981934 |
End bp | 983280 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640874666 |
Product | MATE efflux family protein |
Protein accession | YP_001410413 |
Protein GI | 154249588 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000766798 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGAAAG TAAACGTGCT TAATGAAAGA ATAGAATATT CGTTATTTCA CTTAGCATGG CCTCTCATAG TTTCAAACGC GCTTCAAACA ATTTACAATA TCGTTGATTC TTATTTTCTA GGTAAGCTTG GGCCTGTACA ATTCTCAGCT TCCACAATTA CTTGGCCCGT TATATTCACA TTTATCTCAC TTGCCATGGG TTTTTCAAAC GCTGGGATAG CTATTGTCTC ACAAAGTTAC GGAAAAATGG ATATACAAAA GGTTAAAAAA TCAATGGGGC AGTTATACCT TGTTACGATA TCCGTTGGTT TGCTGGCTAC CGTACTAGGA ATCGCTTTTG CAAAACCTAT ATTGAACTCT ATCGCGGGTT CTGAAAGTAG AGATGTTGTC CCGTATGCTT TAAAATACTA CATAGTAGAT ATGTTAGGTC TTCCACTTGT ATTTATAATC AACAGCACAA CTTCCGCAAT ACGCGCCGTC GGTGATTCTC AATTTGGCAT GAGAATAACC CTTTACATGA ATCTTGTAAA TATGTTTTTC GATCCACTAT TGATATTCGG TATTGGACCA TTTCCTAAGC TTGGTGTTGC TGGTGCGGCT TGGGCTACTA ATATTGGTCG GTTTATAGCA GCTGGAATTT CTTTATACCA TGTTGCTTCT AAACAAGCTC ATGTGAAAAT ATCGAAAAGC GATTTTAAAC CAGATTGGAA GATTATAGGC TTGATTTTTA AGCTTGGACT TCCAAGCGCG CTTGGAATGT CAATAACATC GGCTGGTTTC GCTGTTATTA TGAAATATGT GGCTATGTTT GGTCCCGCCG TAATAAGTGC TTACGGGATA GGTAATAGGG TTACCAATTT GGTTTCTATG ATATCTTTCG GGCTTGCCGG CGCTGTTTCC ACAATGGTTG GACAGTTTAT CGGTGCAAAG AGATATAAAG ATGCTGAATA TACAGTTTTA AAAGCGTTTT ACTGGAATAT AACCATTATC GGCGTGTTAT CTTTATTGAC ATTTATATAT GGTAAGCAAG TGACTCAATT CTTTATAAAC GATCCAAAAG TTATACAAAT GGGAGAAATC TATTTCAAAT ACATATCTTT CTCAATGCCC ATCTTTACGG CTTATATGAT TTATAACAAC GCGCTGATTG GAGCTGGGAA GACGATACTA ACCATGGTTG GCGATATACT CCGTTTATGG GGAATTAGAA TCCCTATCAT CGCAACATTA TCTCTCACCT TTGGTTTTAA AGGTATCTTC GTTGGAATGA TAATAAGTAA CCTAATTGTT TTTGTTATAA CTTATCTTTT CTTTAGGCTT TCCAATTGGA AAAAAAGCGT GGTATAA
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Protein sequence | MAKVNVLNER IEYSLFHLAW PLIVSNALQT IYNIVDSYFL GKLGPVQFSA STITWPVIFT FISLAMGFSN AGIAIVSQSY GKMDIQKVKK SMGQLYLVTI SVGLLATVLG IAFAKPILNS IAGSESRDVV PYALKYYIVD MLGLPLVFII NSTTSAIRAV GDSQFGMRIT LYMNLVNMFF DPLLIFGIGP FPKLGVAGAA WATNIGRFIA AGISLYHVAS KQAHVKISKS DFKPDWKIIG LIFKLGLPSA LGMSITSAGF AVIMKYVAMF GPAVISAYGI GNRVTNLVSM ISFGLAGAVS TMVGQFIGAK RYKDAEYTVL KAFYWNITII GVLSLLTFIY GKQVTQFFIN DPKVIQMGEI YFKYISFSMP IFTAYMIYNN ALIGAGKTIL TMVGDILRLW GIRIPIIATL SLTFGFKGIF VGMIISNLIV FVITYLFFRL SNWKKSVV
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